Inhaltspezifische Aktionen



Chakraborty T, Barbuddhe SB. Enabling One Health solutions through genomics. Indian J Med Res. 2021 Mar;153(3):273-279. doi: 10.4103/ijmr.IJMR_576_21. PMID: 33906989; PMCID: PMC8204826.

Sváb D, Falgenhauer L, Chakraborty T, Tóth I. Complete Genome Sequences of Novel Bovine T4, rv5-Like, and Dhillonviruses Effective against Escherichia coli O157. Microbiol Resour Announc. 2021 Jan 7;10(1):e01261-20. doi: 10.1128/MRA.01261-20. PMID: 33414348; PMCID: PMC8407724.

Mraheil MA, Toque HA, La Pietra L, Hamacher J, Phanthok T, Verin A, Gonzales J, Su Y, Fulton D, Eaton DC, Chakraborty T, Lucas R. Dual Role of Hydrogen Peroxide as an Oxidant in Pneumococcal Pneumonia. Antioxid Redox Signal. 2021 Apr 20;34(12):962-978. doi: 10.1089/ars.2019.7964. Epub 2020 Aug 14. PMID: 32283950; PMCID: PMC8035917.

Chakraborty T, Sadek M, Yao Y, Imirzalioglu C, Stephan R, Poirel L, Nordmann P. Cross-Border Emergence of Escherichia coli Producing the Carbapenemase NDM-5 in Switzerland and Germany. J Clin Microbiol. 2021 Feb 18;59(3):e02238-20. doi: 10.1128/JCM.02238-20. PMID: 33361340; PMCID: PMC8106709.

Zhang Z, Wang M, Zhang Y, Zhang Y, Bartkuhn M, Markmann M, Hossain H, Chakraborty T, Hake SB, Jia Z, Meinhardt A, Bhushan S. Uropathogenic Escherichia coli Virulence Factor α-Hemolysin Reduces Histone Acetylation to Inhibit Expression of Proinflammatory Cytokine Genes. J Infect Dis. 2021 Mar 29;223(6):1040-1051. doi: 10.1093/infdis/jiab018. PMID: 33453118.

Sváb D, Falgenhauer L, Horváth B, Maróti G, Falgenhauer J, Chakraborty T, Tóth I. Genome Analysis of a Historical Shigella dysenteriae Serotype 1 Strain Carrying a Conserved Stx Prophage Region. Front Microbiol. 2021 Jan 8;11:614793. doi: 10.3389/fmicb.2020.614793. PMID: 33488558; PMCID: PMC7819885.

Adel-Khattab D, Groeger S, Domann E, Chakraborty T, Lochnit G, Meyle J. Porphyromonas gingivalis induced up-regulation of PD-L1 in colon carcinoma cells. Mol Oral Microbiol. 2021 Jun;36(3):172-181. doi: 10.1111/omi.12332. PMID: 33715305.

Groeger S, Hudel M, Zechel S, Chakraborty T, Lochnit G, Meyle J, Domann E. Generation and functional characterization of recombinant Porphyromonas gingivalis W83 FimA. J Biotechnol. 2021 Aug 31;340:22-29. doi:10.1016/j.jbiotec.2021.08.009. Epub ahead of print. PMID: 34478774.

Gonzales J, Chakraborty T, Romero M, Mraheil MA, Kutlar A, Pace B, Lucas R. Streptococcus pneumoniae and Its Virulence Factors H2O2 and Pneumolysin Are Potent Mediators of the Acute Chest Syndrome in Sickle Cell Disease. Toxins (Basel). 2021 Feb 17;13(2):157. doi: 10.3390/toxins13020157. PMID: 33671422; PMCID: PMC7922783.

Nordmann P, Yao Y, Falgenhauer L, Sadek M, Imirzalioglu C, Chakraborty T. Recent emergence of aztreonam-avibactam resistance in NDM and OXA-48carbapenemase-producing Escherichia coli in Germany. Antimicrob Agents Chemother. 2021 Aug 23:AAC0109021. doi: 10.1128/AAC.01090-21. Epub ahead of print. PMID: 34424048.

Blume F, Kirsten H, Ahnert P, Chakraborty T, Gross A, Horn K, Toliat MR, Nürnberg P, Westenfelder EM, Goepel W, Scholz M. Verification of immunology-related genetic associations in BPD supports ABCA3 and five other genes. Pediatr Res. 2021 Aug 31. doi: 10.1038/s41390-021-01689-y. Epub ahead of print. PMID: 34465876.

Falgenhauer L, Preuser I, Imirzalioglu C, Falgenhauer J, Fritzenwanker M, Mack D, Best C, Heudorf U, Chakraborty T. Changing epidemiology of vancomycin-resistant Enterococcus faecium: Results of a genome-based study at a regional neurological acute hospital with intensive care and early rehabilitation treatment. Infect Prev Pract. 2021 Mar 27;3(2):100138. doi: 10.1016/j.infpip.2021.100138. PMID: 34368749; PMCID: PMC8335922.


Bortolaia V, Kaas RS, Ruppe E, Roberts MC, Schwarz S, Cattoir V, Philippon A, Allesoe RL, Rebelo AR, Florensa AF, Fagelhauer L, Chakraborty T, Neumann B, Werner G, Bender JK, Stingl K, Nguyen M, Coppens J, Xavier BB, Malhotra-Kumar S, Westh H, Pinholt M, Anjum MF, Duggett NA, Kempf I, Nykäsenoja S, Olkkola S, Wieczorek K, Amaro A, Clemente L, Mossong J, Losch S, Ragimbeau C, Lund O, Aarestrup FM. ResFinder 4.0 for predictions of phenotypes from genotypes. JAntimicrob Chemother. 2020 Dec 1;75(12):3491-3500. doi: 10.1093/jac/dkaa345. PMID: 32780112; PMCID: PMC7662176.

Lucas R, Hadizamani Y, Gonzales J, Gorshkov B, Bodmer T, Berthiaume Y, Moehrlen U, Lode H, Huwer H, Hudel M, Mraheil MA, Toque HAF, Chakraborty T, Hamacher J. Impact of Bacterial Toxins in the Lungs. Toxins (Basel). 2020 Apr 2;12(4):223. doi: 10.3390/toxins12040223. PMID: 32252376; PMCID: PMC7232160.

Ayeni FA, Falgenhauer J, Schmiedel J, Schwengers O, Chakraborty T, Falgenhauer L. Detection of blaCTX-M-27-encoding Escherichia coli ST206 in Nigerian poultry stocks. J Antimicrob Chemother. 2020 Oct 1;75(10):3070-3072. doi: 10.1093/jac/dkaa293. PMID: 32688376.

La Pietra L, Hudel M, Pillich H, Abu Mraheil M, Berisha B, Aden S, Hodnik V, Lochnit G, Rafiq A, Perniss A, Anderluh G, Chakraborty T. Phosphocholine Antagonizes Listeriolysin O-Induced Host Cell Responses of Listeria monocytogenes. J Infect Dis. 2020 Oct 1;222(9):1505-1516. doi: 10.1093/infdis/jiaa022. PMID: 31970394.

Masseron A, Poirel L, Falgenhauer L, Imirzalioglu C, Kessler J, Chakraborty T, Nordmann P. Ongoing dissemination of OXA-244 carbapenemase-producing Escherichia coli in Switzerland and their detection. Diagn Microbiol Infect Dis. 2020 Jul;97(3):115059. doi: 10.1016/j.diagmicrobio.2020.115059. Epub 2020 Apr 8. PMID: 32387849.

Yin Y, Doijad S, Wang W, Lian K, Pan X, Koryciński I, Hu Y, Tan W, Ye S, Wang Z, Pan Z, Chakraborty T, Jiao X. Genetic Diversity of <i>Listeria monocytogenes</i> Isolates from Invasive Listeriosis in China. Foodborne Pathog Dis. 2020 Mar;17(3):215-227. doi: 10.1089/fpd.2019.2693. Epub 2019 Nov 11. PMID: 32150465.

Schwengers O, Hoek A, Fritzenwanker M, Falgenhauer L, Hain T, Chakraborty T, Goesmann A. ASA3P: An automatic and scalable pipeline for the assembly, annotation and higher-level analysis of closely related bacterial isolates. PLoS Comput Biol. 2020 Mar 5;16(3):e1007134. doi: 10.1371/journal.pcbi.1007134. PMID: 32134915; PMCID: PMC7077848.

Falgenhauer L, Nordmann P, Imirzalioglu C, Yao Y, Falgenhauer J, Hauri AM, Heinmüller P, Chakraborty T. Cross-border emergence of clonal lineages of ST38 Escherichia coli producing the OXA-48-like carbapenemase OXA-244 in Germany and Switzerland. Int J Antimicrob Agents. 2020 Dec;56(6):106157. doi: 10.1016/j.ijantimicag.2020.106157. Epub 2020 Sep 9. PMID: 32919009.

Schwengers O, Barth P, Falgenhauer L, Hain T, Chakraborty T, Goesmann A. Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores. Microb Genom. 2020 Oct;6(10):mgen000398. doi: 10.1099/mgen.0.000398. PMID: 32579097; PMCID: PMC7660248.

Lauer T, Behnke J, Oehmke F, Baecker J, Gentil K, Chakraborty T, Schloter M, Gertheiss J, Ehrhardt H. Bacterial Colonization within the First Six Weeks of Life and Pulmonary Outcome in Preterm Infants <1000 g. J Clin Med. 2020 Jul 15;9(7):2240. doi: 10.3390/jcm9072240. PMID: 32679682; PMCID: PMC7408743.

Mraheil MA, Toque HA, La Pietra L, Hamacher J, Phanthok T, Verin A, Gonzales J, Su Y, Fulton D, Eaton DC, Chakraborty T, Lucas R. Dual Role of Hydrogen Peroxide as an Oxidant in Pneumococcal Pneumonia. Antioxid Redox Signal. 2021 Apr 20;34(12):962-978. doi: 10.1089/ars.2019.7964. Epub 2020 Aug 14. PMID: 32283950; PMCID: PMC8035917.

Prieto A, Bernabeu M, Falgenhauer L, Chakraborty T, Hüttener M, Juárez A. Overexpression of the third H-NS paralogue H-NS2 compensates fitness loss in hns mutants of the enteroaggregative Escherichia coli strain 042. Sci Rep. 2020 Oct 22;10(1):18131. doi: 10.1038/s41598-020-75204-4. PMID: 33093592; PMCID: PMC7582179.

Sváb D, Falgenhauer L, Horváth B, Maróti G, Falgenhauer J, Chakraborty T, Tóth I. Genome Analysis of a Historical <i>Shigella dysenteriae</i> Serotype 1 Strain Carrying a Conserved Stx Prophage Region. Front Microbiol. 2021 Jan 8;11:614793. doi: 10.3389/fmicb.2020.614793. PMID: 33488558; PMCID: PMC7819885.


Ahnert P, Creutz P, Horn K, Schwarzenberger F, Kiehntopf M, Hossain H, Bauer M, Brunkhorst FM, Reinhart K, Völker U, Chakraborty T, Witzenrath M, Löffler M, Suttorp N, Scholz M; PROGRESS Study Group. Sequential organ failure assessment score is an excellent operationalization of disease severity of adult patients with hospitalized community acquired pneumonia - results from the prospective observational PROGRESS study. Crit Care. 2019 Apr 4;23(1):110. doi: 10.1186/s13054-019-2316-x. PubMed PMID: 30947753; PubMed Central PMCID: PMC6450002.

Baccouri O, Boukerb AM, Farhat LB, Zébré A, Zimmermann K, Domann E, Cambronel M, Barreau M, Maillot O, Rincé I, Muller C, Marzouki MN, Feuilloley M, Abidi F, Connil N. Probiotic Potential and Safety Evaluation of Enterococcus faecalis OB14 and OB15, Isolated From Traditional Tunisian Testouri Cheese and Rigouta, Using Physiological and Genomic Analysis. Front Microbiol. 2019 Apr 24;10:881. doi: 10.3389/fmicb.2019.00881. eCollection 2019. PubMed PMID: 31105672; PubMed Central PMCID: PMC6491886.

Biehl LM, Higgins P, Wille T, Peter K, Hamprecht A, Peter S, Dörfel D, Vogel W, Häfner H, Lemmen S, Panse J, Rohde H, Klupp EM, Schafhausen P, Imirzalioglu C, Falgenhauer L, Salmanton-García J, Stecher M, Vehreschild JJ, Seifert H, Vehreschild MJGT. Impact of single-room contact precautions on hospital-acquisition and transmission of multidrug-resistant Escherichia coli: a prospective multicentre cohort study in haematological and oncological wards. Clin Microbiol Infect. 2019 Aug;25(8):1013-1020. doi: 10.1016/j.cmi.2018.12.029. Epub 2019 Jan 12. PubMed PMID: 30641228.

Brunotte M, Rupp M, Stötzel S, Sommer U, Mohammed W, Thormann U, Heiss C, Lips KS, Domann E, Alt V. A new small animal model for simulating a two-stage-revision procedure in implant-related methicillin-resistant Staphylococcus aureus bone infection. Injury. 2019 Nov;50(11):1921-1928. doi: 10.1016/j.injury.2019.08.017. Epub 2019 Aug 15. PubMed PMID: 31451184.

Dabrowski AN, Shrivastav A, Conrad C, Komma K, Weigel M, Dietert K, Gruber AD, Bertrams W, Wilhelm J, Schmeck B, Reppe K, N'Guessan PD, Aly S, Suttorp N, Hain T, Zahlten J. Peptidoglycan Recognition Protein 4 Limits Bacterial Clearance and Inflammation in Lungs by Control of the Gut Microbiota. Front Immunol. 2019 Sep 20;10:2106. doi: 10.3389/fimmu.2019.02106. eCollection 2019. PubMed PMID: 31616404; PubMed Central PMCID: PMC6763742.

Doijad S, Chakraborty T. Genome-based analyses indicate that Serratia marcescens subsp. marcescens and Serratia marcescens subsp. sakuensis do not merit separation to subspecies status. Int J Syst Evol Microbiol. 2019 Dec;69(12):3924-3926. doi: 10.1099/ijsem.0.003706. Epub 2019 Sep 6. PubMed PMID: 31490113.

Falgenhauer J, Imirzalioglu C, Falgenhauer L, Yao Y, Hauri AM, Erath B, Schwengers O, Goesmann A, Seifert H, Chakraborty T, Doijad S. Whole-Genome Sequences of Clinical Enterobacter bugandensis Isolates from Germany. Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00465-19. doi: 10.1128/MRA.00465-19. PubMed PMID: 31320432; PubMed Central PMCID: PMC6639611.

Falgenhauer L, Fritzenwanker M, Imirzalioglu C, Steul K, Scherer M; Rhine-Main VREfm study group, Heudorf U, Chakraborty T. Near-ubiquitous presence of a vancomycin-resistant Enterococcus faecium ST117/CT71/vanB -clone in the Rhine-Main metropolitan area of Germany. Antimicrob Resist Infect Control. 2019 Jul 29;8:128. doi: 10.1186/s13756-019-0573-8. eCollection 2019. PubMed PMID: 31384433; PubMed Central PMCID: PMC6664515.

Falgenhauer L, Imirzalioglu C, Oppong K, Akenten CW, Hogan B, Krumkamp R, Poppert S, Levermann V, Schwengers O, Sarpong N, Owusu-Dabo E, May J, Eibach D. Detection and Characterization of ESBL-Producing Escherichia coli From Humans and Poultry in Ghana. Front Microbiol. 2019 Jan 15;9:3358. doi: 10.3389/fmicb.2018.03358. eCollection 2018. PubMed PMID: 30697208; PubMed Central PMCID: PMC6340976.

Fischer D, Schlößer RL, Kempf VAJ, Wichelhaus TA, Klingebiel T, Philippi S, Falgenhauer L, Imirzalioglu C, Dahl U, Brandt C, Reinheimer C. Overcrowding in a neonatal intermediate care unit: impact on the incidence of multidrug-resistant gram-negative organisms. BMC Infect Dis. 2019 Apr 29;19(1):357. doi: 10.1186/s12879-019-3981-8. PubMed PMID: 31035966; PubMed Central PMCID: PMC6489334.

Frantz R, Teubner L, Schultze T, La Pietra L, Müller C, Gwozdzinski K, Pillich H, Hain T, Weber-Gerlach M, Panagiotidis GD, Mostafa A, Weber F, Rohde M, Pleschka S, Chakraborty T, Abu Mraheil M. The secRNome of Listeria monocytogenes Harbors Small Noncoding RNAs That Are Potent Inducers of Beta Interferon. MBio. 2019 Oct 8;10(5). pii: e01223-19. doi: 10.1128/mBio.01223-19. PubMed PMID: 31594810; PubMed Central PMCID: PMC6786865.

Hamprecht A, Sommer J, Willmann M, Brender C, Stelzer Y, Krause FF, Tsvetkov T, Wild F, Riedel-Christ S, Kutschenreuter J, Imirzalioglu C, Gonzaga A, Nübel U, Göttig S. Pathogenicity of Clinical OXA-48 Isolates and Impact of the OXA-48 IncL Plasmid on Virulence and Bacterial Fitness. Front Microbiol. 2019 Nov 1;10:2509. doi: 10.3389/fmicb.2019.02509. eCollection 2019. PubMed PMID: 31736929; PubMed Central PMCID: PMC6838017.

Kishnani PM, Kurkure NV, Barbuddhe SB, Doijad SP, Chakraborty T, Daginawala HF, Singh LK, Kashyap RS. Draft Genome Sequence of Listeria monocytogenes CIIMS-NV-3, a Strain Isolated from Vaginal Discharge of a Woman from Central India. Microbiol Resour Announc. 2019 Feb 7;8(6). pii: e01553-18. doi: 10.1128/MRA.01553-18. eCollection 2019 Feb. PubMed PMID: 30746522; PubMed Central PMCID: PMC6368657.

Pilatz A, Kilb J, Kaplan H, Fietz D, Hossain H, Schüttler CG, Diemer T, Bergmann M, Domann E, Weidner W, Wagenlehner F, Schuppe HC. High prevalence of urogenital infection/inflammation in patients with azoospermia does not impede surgical sperm retrieval. Andrologia. 2019 Nov;51(10):e13401. doi: 10.1111/and.13401. Epub 2019 Aug 27. PubMed PMID: 31456226.

Regier Y, Komma K, Weigel M, Kraiczy P, Laisi A, Pulliainen AT, Hain T, Kempf VAJ. Combination of microbiome analysis and serodiagnostics to assess the risk of pathogen transmission by ticks to humans and animals in central Germany. Parasit Vectors. 2019 Jan 7;12(1):11. doi: 10.1186/s13071-018-3240-7. PubMed PMID: 30616666; PubMed Central PMCID: PMC6322329.

Salze M, Giard JC, Riboulet-Bisson E, Hain T, Rincé A, Muller C. Identification of the general stress stimulon related to colonization in Enterococcus faecalis. Arch Microbiol. 2019 Oct 10. doi: 10.1007/s00203-019-01735-8. [Epub ahead of print] PubMed PMID: 31599337.

Shehata MM, Mostafa A, Teubner L, Mahmoud SH, Kandeil A, Elshesheny R, Frantz R, La Pietra L, Pleschka S, Osman A, Kayali G, Chakraborty T, Ali MA, Mraheil MA. Bacterial Outer Membrane Vesicles (OMVs)-based Dual Vaccine for Influenza A H1N1 Virus and MERS-CoV. Vaccines (Basel). 2019 May 28;7(2). pii: E46. doi: 10.3390/vaccines7020046. PubMed PMID: 31141982; PubMed Central PMCID: PMC6631769.

Suarez C, Ratering S, Hain T, Fritzenwanker M, Goesmann A, Blom J, Chakraborty T, Bunk B, Spröer C, Overmann J, Schnell S. Complete Genome Sequence of the Plant Growth-Promoting Bacterium Hartmannibacter diazotrophicus Strain E19(T). Int J Genomics. 2019 Sep 9;2019:7586430. doi: 10.1155/2019/7586430. eCollection 2019. PubMed PMID: 31583244; PubMed Central PMCID: PMC6754898.

Sváb D, Falgenhauer L, Rohde M, Chakraborty T, Tóth I. Complete genome sequence of C130_2, a novel myovirus infecting pathogenic Escherichia coli and Shigella strains. Arch Virol. 2019 Jan;164(1):321-324. doi: 10.1007/s00705-018-4042-0. Epub 2018 Sep 20. PubMed PMID: 30238162.

Yin Y, Yao H, Doijad S, Kong S, Shen Y, Cai X, Tan W, Wang Y, Feng Y, Ling Z, Wang G, Hu Y, Lian K, Sun X, Liu Y, Wang C, Jiao K, Liu G, Song R, Chen X, Pan Z, Loessner MJ, Chakraborty T, Jiao X. A hybrid sub-lineage of Listeria monocytogenes comprising hypervirulent isolates. Nat Commun. 2019 Sep 30;10(1):4283. doi: 10.1038/s41467-019-12072-1. PubMed PMID: 31570766; PubMed Central PMCID: PMC6768887.


Maurer J, Hupp S, Pillich H, Mitchell TJ, Chakraborty T, Iliev AI. Missing elimination via membrane vesicle shedding contributes to the diminished calcium sensitivity of listeriolysin O. Sci Rep. 2018 Oct 26;8(1):15846. doi: 10.1038/s41598-018-34031-4. PubMed PMID: 30367146; PubMed Central PMCID: PMC6203718.

Doijad SP, Poharkar KV, Kale SB, Kerkar S, Kalorey DR, Kurkure NV, Rawool DB, Malik SVS, Ahmad RY, Hudel M, Chaudhari SP, Abt B, Overmann J, Weigel M, Hain T, Barbuddhe SB, Chakraborty T. Listeria goaensis sp. nov. Int J Syst Evol Microbiol. 2018 Oct;68(10):3285-3291. doi: 10.1099/ijsem.0.002980. Epub 2018 Aug 29. PubMed PMID: 30156532.

Sváb D, Falgenhauer L, Rohde M, Chakraborty T, Tóth I. Identification andcharacterization of new broad host-range rV5-like coliphages C203 and P206 directed against enterobacteria. Infect Genet Evol. 2018 Oct;64:254-261. doi: 10.1016/j.meegid.2018.07.004. Epub 2018 Jul 4. PubMed PMID: 30033383.

Roer L, Overballe-Petersen S, Hansen F, Schønning K, Wang M, Røder BL, Hansen DS, Justesen US, Andersen LP, Fulgsang-Damgaard D, Hopkins KL, Woodford N, Falgenhauer L, Chakraborty T, Samuelsen Ø, Sjöström K, Johannesen TB, Ng K, Nielsen J, Ethelberg S, Stegger M, Hammerum AM, Hasman H. Escherichia coli Sequence Type 410 Is Causing New International High-Risk Clones. mSphere. 2018 Jul 18;3(4). pii: e00337-18. doi: 10.1128/mSphere.00337-18. PubMed PMID: 30021879; PubMed Central PMCID: PMC6052333.

Irrgang A, Hammerl JA, Falgenhauer L, Guiral E, Schmoger S, Imirzalioglu C, Fischer J, Guerra B, Chakraborty T, Käsbohrer A. Diversity of CTX-M-1-producing E. coli from German food samples and genetic diversity of the bla(CTX-M-1) region on IncI1 ST3 plasmids. Vet Microbiol. 2018 Jul;221:98-104. doi:10.1016/j.vetmic.2018.06.003. Epub 2018 Jun 8. PubMed PMID: 29981716.

Marando R, Seni J, Mirambo MM, Falgenhauer L, Moremi N, Mushi MF, Kayange N, Manyama F, Imirzalioglu C, Chakraborty T, Mshana SE. Predictors of the extended-spectrum-beta lactamases producing Enterobacteriaceae neonatal sepsis at a tertiary hospital, Tanzania. Int J Med Microbiol. 2018 Oct;308(7):803-811. doi: 10.1016/j.ijmm.2018.06.012. Epub 2018 Jul 2. PubMed PMID: 29980372; PubMed Central PMCID: PMC6171784.

Li X, Yu Y, Gorshkov B, Haigh S, Bordan Z, Weintraub D, Rudic RD, Chakraborty T, Barman SA, Verin AD, Su Y, Lucas R, Stepp DW, Chen F, Fulton DJR. Hsp70 Suppresses Mitochondrial Reactive Oxygen Species and Preserves Pulmonary Microvascular Barrier Integrity Following Exposure to Bacterial Toxins. Front Immunol. 2018 Jun 12;9:1309. doi: 10.3389/fimmu.2018.01309. eCollection 2018. PubMed PMID: 29951058; PubMed Central PMCID: PMC6008539.

Kämpfer P, Glaeser SP, Packroff G, Behringer K, Exner M, Chakraborty T, Schmithausen RM, Doijad S. Lelliottia aquatilis sp. nov., isolated from drinking water. Int J Syst Evol Microbiol. 2018 Aug;68(8):2454-2461. doi: 10.1099/ijsem.0.002854. Epub 2018 Jun 22. PubMed PMID: 29932385.

Ferreira V, Magalhães R, Almeida G, Cabanes D, Fritzenwanker M, Chakraborty T, Hain T, Teixeira P. Genome Sequence of Listeria monocytogenes 2542, a Serotype 4b Strain from a Cheese-Related Outbreak in Portugal. Genome Announc. 2018 Jun 21;6(25). pii: e00540-18. doi: 10.1128/genomeA.00540-18. PubMed PMID: 29930053; PubMed Central PMCID: PMC6013623.

Fritzenwanker M, Imirzalioglu C, Herold S, Wagenlehner FM, Zimmer KP, Chakraborty T. Treatment Options for Carbapenem- Resistant Gram-Negative Infections. Dtsch Arztebl Int. 2018 May 21;115(20-21):345-352. doi: 10.3238/arztebl.2018.0345. PubMed PMID: 29914612; PubMed Central PMCID: PMC6172649.

Roschanski N, Fischer J, Falgenhauer L, Pietsch M, Guenther S, Kreienbrock L, Chakraborty T, Pfeifer Y, Guerra B, Roesler UH. Retrospective Analysis of Bacterial Cultures Sampled in German Chicken-Fattening Farms During the Years 2011-2012 Revealed Additional VIM-1 Carbapenemase-Producing Escherichia coli and a Serologically Rough Salmonella enterica Serovar Infantis. Front Microbiol. 2018 Mar 27;9:538. doi: 10.3389/fmicb.2018.00538. eCollection 2018. PubMed PMID: 29636734; PubMed Central PMCID: PMC5880886.

Pati NB, Doijad SP, Schultze T, Mannala GK, Yao Y, Jaiswal S, Ryan D, Suar M, Gwozdzinski K, Bunk B, Mraheil MA, Marahiel MA, Hegemann JD, Spröer C, Goesmann A, Falgenhauer L, Hain T, Imirzalioglu C, Mshana SE, Overmann J, Chakraborty T. Enterobacter bugandensis: a novel enterobacterial species associated with severe clinical infection. Sci Rep. 2018 Mar 29;8(1):5392. doi: 10.1038/s41598-018-23069-z. PubMed PMID: 29599516; PubMed Central PMCID: PMC5876403.

Gwozdzinski K, Azarderakhsh S, Imirzalioglu C, Falgenhauer L, Chakraborty T. An Improved Medium for Colistin Susceptibility Testing. J Clin Microbiol. 2018 Apr 25;56(5). pii: e01950-17. doi: 10.1128/JCM.01950-17. Print 2018 May. PubMed PMID: 29514937; PubMed Central PMCID: PMC5925729.

Lu Y, Rafiq A, Zhang Z, Aslani F, Fijak M, Lei T, Wang M, Kumar S, Klug J, Bergmann M, Chakraborty T, Meinhardt A, Bhushan S. Uropathogenic Escherichia coli virulence factor hemolysin A causes programmed cell necrosis by altering mitochondrial dynamics. FASEB J. 2018 Aug;32(8):4107-4120. doi: 10.1096/fj.201700768R. Epub 2018 Feb 28. PubMed PMID: 29490169.

Sváb D, Falgenhauer L, Rohde M, Szabó J, Chakraborty T, Tóth I. Identification and Characterization of T5-Like Bacteriophages Representing Two Novel Subgroups from Food Products. Front Microbiol. 2018 Feb 13;9:202. doi: 10.3389/fmicb.2018.00202. eCollection 2018. PubMed PMID: 29487585; PubMed Central PMCID: PMC5816814.

Kishnani PM, Tiwari AA, Gautam V, Sharma M, Barbuddhe SB, Doijad SP, Chakraborty T, Nayak AR, Bhartiya NM, Daginawala HF, Singh LR, Kashyap RS. Draft Genome Sequence of Listeria monocytogenes Strain CIIMS-PH-1, a Serovar 4b Isolate from Infant Septicemia. Genome Announc. 2018 Feb 15;6(7). pii: e01320-17. doi: 10.1128/genomeA.01320-17. PubMed PMID: 29449397; PubMed Central PMCID: PMC5814499.

Yang G, Pillich H, White R, Czikora I, Pochic I, Yue Q, Hudel M, Gorshkov B, Verin A, Sridhar S, Isales CM, Eaton DC, Hamacher J, Chakraborty T, Lucas R. Listeriolysin O Causes ENaC Dysfunction in Human Airway Epithelial Cells. Toxins (Basel). 2018 Feb 11;10(2). pii: E79. doi: 10.3390/toxins10020079. PubMed PMID: 29439494; PubMed Central PMCID: PMC5848180.

Perniss A, Schmidt N, Gurtner C, Dietert K, Schwengers O, Weigel M, Hempe J, Ewers C, Pfeil U, Gärtner U, Gruber AD, Kummer W. Bordetella pseudohinzii targets cilia and impairs tracheal cilia-driven transport in naturally acquired infection in mice. Sci Rep. 2018 Apr 9;8(1):5681. doi: 10.1038/s41598-018-23830-4.

Mannala GP, Koettnitz J, Mohamed W, Sommer U, Lips KS, Spröer C, Bunk B, Overmann J, Hain T, Heiss C, Domann E, Alt V. 2018. Whole-genome comparison of high and low virulent Staphylococcus aureus isolates inducing implant-associated bone infections. Int. J. Med. Microbiol. 2018 Jul;308(5):505-513. doi: 10.1016/j.ijmm.2018.04.005. Epub 2018 Apr 25.

Amend S, Frankenberger R, Lücker S, Domann E, Krämer N. Secondary caries formation with a two-species biofilm artificial mouth. Dent. Mater. 2018 May;34(5):786-796. doi: 10.1016/ Epub 2018 Mar 12.

Krämer N, Schmidt M, Lücker S, Domann E, Frankenberger R. 2018. Glass ionomer cement inhibits secondary caries in an in vitro biofilm model. Clin. Oral Invest. 2018 Mar;22(2):1019-1031. doi: 10.1007/s00784-017-2184-1. Epub 2017 Jul 24.

Muhsin M, Ahendra J, Gentil K, Berbudi A, Neumann AL, Klaas L, Schmidt KF, Hoerauf A, Hübner MP. IL-6 is required for protective immune responses against early filarial infection. Int J Parasitol. 2018 Oct;48(12):925-935. doi: 10.1016/j.ijpara.2018.05.011. Epub 2018 Sep 1.

Regier Y, Komma K, Weigel M, Pulliainen AT, Göttig S, Hain T, Kempf VAJ. Microbiome analysis reveals the presence of Bartonella spp. and Acinetobacter spp. in deer keds (Lipoptena cervi). Front Microbiol. 2018 Dec 20;9:3100. doi: 10.3389/fmicb.2018.03100. eCollection 2018.

Ehmann R, Kristen-Burmann C, Bank-Wolf B, König M, Herden C, Hain T, Thiel HJ, Ziebuhr J, Tekes G. Reverse Genetics for Type I Feline Coronavirus Field Isolate To Study the Molecular Pathogenesis of Feline Infectious Peritonitis. MBio. 2018 Jul 31;9(4). pii: e01422-18. doi: 10.1128/mBio.01422-18. PMID:30065095

Whitmer SLM, Strecker T, Cadar D, Dienes HP, Faber K, Patel K, Brown SM, Davis WG, Klena JD, Rollin PE, Schmidt-Chanasit J, Fichet-Calvet E, Noack B, Emmerich P, Rieger T, Wolff S, Fehling SK, Eickmann M, Mengel JP, Schultze T, Hain T, Ampofo W, Bonney K, Aryeequaye JND, Ribner B, Varkey JB, Mehta AK, Lyon GM 3rd, Kann G, De Leuw P, Schuettfort G, Stephan C, Wieland U, Fries JWU, Kochanek M, Kraft CS, Wolf T, Nichol ST, Becker S, Ströher U, Günther S. New Lineage of Lassa Virus, Togo, 2016. Emerg Infect Dis. 2018 Mar;24(3):599-602. doi: 10.3201/eid2403.171905. PMID: 29460758


Ghosh H, Bunk B, Doijad S, Schmiedel J, Falgenhauer L, Spröer C, Imirzalioglu C, Overmann J, Chakraborty T. Complete Genome Sequence of bla(CTX-M-27)-Encoding Escherichia coli Strain H105 of Sequence Type 131 Lineage C1/H30R. Genome Announc. 2017 Aug 3;5(31). pii: e00736-17. doi: 10.1128/genomeA.00736-17. PubMed PMID: 28774984.

Yao Y, Lazaro-Perona F, Falgenhauer L, Valverde A, Imirzalioglu C, Dominguez L, Cantón R, Mingorance J, Chakraborty T. Insights into a Novel bla(KPC-2)-Encoding IncP-6 Plasmid Reveal Carbapenem-Resistance Circulation in Several Enterobacteriaceae Species from Wastewater and a Hospital Source in Spain. Front Microbiol. 2017 Jun 28;8:1143. doi: 10.3389/fmicb.2017.01143. eCollection 2017. PubMed PMID: 28702005; PubMed Central PMCID: PMC5487458.

Wang M, Fijak M, Hossain H, Markmann M, Nüsing RM, Lochnit G, Hartmann MF, Wudy SA, Zhang L, Gu H, Konrad L, Chakraborty T, Meinhardt A, Bhushan S. Characterization of the Micro-Environment of the Testis that Shapes the Phenotype and Function of Testicular Macrophages. J Immunol. 2017 Jun 1;198(11):4327-4340. doi: 10.4049/jimmunol.1700162. Epub 2017 May 1. PubMed PMID: 28461571.

Mraheil MA, Frantz R, Teubner L, Wendt H, Linne U, Wingerath J, Wirth T, Chakraborty T. Requirement of the RNA-binding protein SmpB during intracellular growth of Listeria monocytogenes. Int J Med Microbiol. 2017 Apr;307(3):166-173. doi: 10.1016/j.ijmm.2017.01.007. Epub 2017 Feb 1. PubMed PMID: 28202229.

Imirzalioglu C, Falgenhauer L, Schmiedel J, Waezsada SE, Gwozdzinski K, Roschanski N, Roesler U, Kreienbrock L, Schiffmann AP, Irrgang A, Käsbohrer A, Bauerfeind R, Domann E, Chakraborty T. Evaluation of a Loop-Mediated Isothermal Amplification-Based Assay for the Rapid Detection of Plasmid-Encoded Colistin Resistance Gene mcr-1 in Enterobacteriaceae Isolates. Antimicrob Agents Chemother. 2017 Mar 24;61(4). pii: e02326-16. doi: 10.1128/AAC.02326-16. Print 2017 Apr. PubMed PMID: 28137796; PubMed Central PMCID: PMC5365674.

Guenther S, Falgenhauer L, Semmler T, Imirzalioglu C, Chakraborty T, Roesler U, Roschanski N. Environmental emission of multiresistant Escherichia coli carrying the colistin resistance gene mcr-1 from German swine farms. J Antimicrob Chemother. 2017 May 1;72(5):1289-1292. doi: 10.1093/jac/dkw585. PubMed PMID: 28122910.

Yao Y, Falgenhauer L, Kempf VA, Hogardt M, Göttig S, Imirzalioglu C, Chakraborty T. Draft Genome Sequences of Pandrug-Resistant Serratia marcescens Clinical Isolates Harboring blaNDM-1. Genome Announc. 2017 Jan 19;5(3). pii: e01481-16. doi: 10.1128/genomeA.01481-16. PubMed PMID: 28104656; PubMed Central PMCID: PMC5255929.

Maurer J, Hupp S, Bischoff C, Foertsch C, Mitchell TJ, Chakraborty T, Iliev AI. Distinct Neurotoxicity Profile of Listeriolysin O from Listeria monocytogenes. Toxins (Basel). 2017 Jan 13;9(1). pii: E34. doi: 10.3390/toxins9010034. PubMed PMID: 28098781; PubMed Central PMCID: PMC5308266.

Falgenhauer L, Ghosh H, Doijad S, Yao Y, Bunk B, Spröer C, Kaase M, Hilker R, Overmann J, Imirzalioglu C, Chakraborty T. Genome Analysis of the Carbapenem- and Colistin-Resistant Escherichia coli Isolate NRZ14408 Reveals Horizontal Gene Transfer Pathways towards Panresistance and Enhanced Virulence. Antimicrob Agents Chemother. 2017 Mar 24;61(4). pii: e02359-16. doi: 10.1128/AAC.02359-16. Print 2017 Apr. PubMed PMID: 28096159; PubMed Central PMCID: PMC5365728.


Chen F, Wang Y, Rafikov R, Haigh S, Zhi WB, Kumar S, Doulias PT, Rafikova O, Pillich H, Chakraborty T, Lucas R, Verin AD, Catravas JD, She JX, Black SM, Fulton DJ. RhoA S-nitrosylation as a regulatory mechanism influencing endothelial barrier function in response to G(+)-bacterial toxins. Biochem Pharmacol. 2017 Mar 1;127:34-45. doi: 10.1016/j.bcp.2016.12.014. Epub 2016 Dec 22. PubMed PMID: 28017778.

Fritzenwanker M, Imirzalioglu C, Gentil K, Falgenhauer L, Wagenlehner FM, Chakraborty T. Incidental detection of a urinary Escherichia coli isolate harbouring mcr-1 of a patient with no history of colistin treatment. Clin Microbiol Infect. 2016 Nov;22(11):954-955. doi: 10.1016/j.cmi.2016.08.027. Epub 2016 Sep 8. PubMed PMID: 27615721.

Pillich H, Puri M, Chakraborty T. ActA of Listeria monocytogenes and Its Manifold Activities as an Important Listerial Virulence Factor. Curr Top Microbiol Immunol. 2017;399:113-132. doi: 10.1007/82_2016_30. Review. PubMed PMID: 27726006.

Mohamed W, Domann E, Chakraborty T, Mannala G, Lips KS, Heiss C, Schnettler R, Alt V. TLR9 mediates S. aureus killing inside osteoblasts via induction of oxidative stress. BMC Microbiol. 2016 Oct 3;16(1):230. PubMed PMID: 27716055; PubMed Central PMCID: PMC5048406.

Rawool DB, Doijad SP, Poharkar KV, Negi M, Kale SB, Malik SV, Kurkure NV, Chakraborty T, Barbuddhe SB. A multiplex PCR for detection of Listeria monocytogenes and its lineages. J Microbiol Methods. 2016 Nov;130:144-147. doi: 10.1016/j.mimet.2016.09.015. Epub 2016 Sep 23. PubMed PMID: 27671346.

Lucas R, Yue Q, Alli A, Duke BJ, Al-Khalili O, Thai TL, Hamacher J, Sridhar S, Lebedyeva I, Su H, Tzotzos S, Fischer B, Gameiro AF, Loose M, Chakraborty T, Shabbir W, Aufy M, Lemmens-Gruber R, Eaton DC, Czikora I. The Lectin-like Domain of TNF Increases ENaC Open Probability through a Novel Site at the Interface between the Second Transmembrane and C-terminal Domains of the α-Subunit. J Biol Chem. 2016 Nov 4;291(45):23440-23451. Epub 2016 Sep 19. PubMed PMID: 27645999; PubMed Central PMCID: PMC5095400.

Fritzenwanker M, Imirzalioglu C, Chakraborty T, Wagenlehner FM. Modern diagnostic methods for urinary tract infections. Expert Rev Anti Infect Ther. 2016 Nov;14(11):1047-1063. Epub 2016 Sep 26. PubMed PMID: 27624932.

Hilgendorff A, Windhorst A, Klein M, Tchatalbachev S, Windemuth-Kieselbach C, Kreuder J, Heckmann M, Gkatzoflia A, Ehrhardt H, Mysliwietz J, Maier M, Izar B, Billion A, Gortner L, Chakraborty T, Hossain H. Gene expression profiling at birth characterizing the preterm infant with early onset infection. J Mol Med (Berl). 2017 Feb;95(2):169-180. doi: 10.1007/s00109-016-1466-4. Epub 2016 Aug 30. PubMed PMID: 27576916; PubMed Central PMCID: PMC5239802.

Ahnert P, Creutz P, Scholz M, Schütte H, Engel C, Hossain H, Chakraborty T, Bauer M, Kiehntopf M, Völker U, Hammerschmidt S, Loeffler M, Suttorp N; PROGRESS study group. PROGRESS - prospective observational study on hospitalized community acquired pneumonia. BMC Pulm Med. 2016 Jul 28;16(1):108. doi:10.1186/s12890-016-0255-8. PubMed PMID: 27535544; PubMed Central PMCID:PMC4987996.

Glaeser SP, Doijad S, Hijazin M, Chakraborty T, Falsen E, Hall V, Kämpfer P. Varibaculum anthropi sp. nov. represented by three genetically different genomovars isolated from clinical material and emended description of the genus Varibaculum. Syst Appl Microbiol. 2016 Dec;39(8):546-552. doi: 10.1016/j.syapm.2016.09.002. Epub 2016 Sep 20. PubMed PMID: 27745752.

Moremi N, Manda EV, Falgenhauer L, Ghosh H, Imirzalioglu C, Matee M, Chakraborty T, Mshana SE. Predominance of CTX-M-15 among ESBL Producers from Environment and Fish Gut from the Shores of Lake Victoria in Mwanza, Tanzania. Front Microbiol. 2016 Dec 1;7:1862. eCollection 2016. PubMed PMID: 27990135; PubMed Central PMCID: PMC5130978.

Fischer S, Lamping M, Gold M, Röttger Y, Brödje D, Dodel R, Frantz R, Mraheil MA, Chakraborty T, Geyer A. Synthesis of a biological active β-hairpin peptide by addition of two structural motifs. Bioorg Med Chem. 2017 Jan 15;25(2):603-608. doi: 10.1016/j.bmc.2016.11.022. Epub 2016 Nov 15. PubMed PMID: 27887962.

Groeger S, Howaldt HP, Raifer H, Gattenloehner S, Chakraborty T, Meyle J. Oral Squamous Carcinoma Cells Express B7-H1 and B7-DC Receptors in Vivo. Pathol Oncol Res. 2017 Jan;23(1):99-110. doi: 10.1007/s12253-016-0100-7. Epub 2016 Aug 8. PubMed PMID: 27498988.

Doijad S, Ghosh H, Glaeser S, Kämpfer P, Chakraborty T. Taxonomic reassessment of the genus Elizabethkingia using whole-genome sequencing: Elizabethkingia endophytica Kämpfer et al. 2015 is a later subjective synonym of Elizabethkingia anophelis Kämpfer et al. 2011. Int J Syst Evol Microbiol. 2016 Nov;66(11):4555-4559. doi: 10.1099/ijsem.0.001390. Epub 2016 Aug 5. PubMed PMID: 27498788.

Falgenhauer L, Waezsada SE, Gwozdzinski K, Ghosh H, Doijad S, Bunk B, Spröer C, Imirzalioglu C, Seifert H, Irrgang A, Fischer J, Guerra B, Käsbohrer A, Overmann J, Goesmann A, Chakraborty T. Chromosomal Locations of mcr-1 and bla CTX-M-15 in Fluoroquinolone-Resistant Escherichia coli ST410. Emerg Infect Dis. 2016 Sep;22(9):1689-91. doi: 10.3201/eid2209.160692. Epub 2016 Sep 15. PubMed PMID: 27322919; PubMed Central PMCID: PMC4994348.

Barbuddhe SB, Doijad SP, Goesmann A, Hilker R, Poharkar KV, Rawool DB, Kurkure NV, Kalorey DR, Malik SS, Shakuntala I, Chaudhari S, Waskar V, D'Costa D, Kolhe R, Arora R, Roy A, Raorane A, Kale S, Pathak A, Negi M, Kaur S, Waghmare R, Warke S, Shoukat S, Harish B, Poojary A, Madhavaprasad C, Nagappa K, Das S, Zende R, Garg S, Bhosle S, Radriguez S, Paturkar A, Fritzenwanker M, Ghosh H, Hain T, Chakraborty T. Presence of a widely disseminated Listeria monocytogenes serotype 4b clone in India. Emerg Microbes Infect. 2016 Jun 8;5:e55. doi: 10.1038/emi.2016.55. PubMed PMID: 27273224; PubMed Central PMCID: PMC4932648.

Falgenhauer L, Imirzalioglu C, Ghosh H, Gwozdzinski K, Schmiedel J, Gentil K, Bauerfeind R, Kämpfer P, Seifert H, Michael GB, Schwarz S, Pfeifer Y, Werner G, Pietsch M, Roesler U, Guerra B, Fischer J, Sharp H, Käsbohrer A, Goesmann A, Hille K, Kreienbrock L, Chakraborty T. Circulation of clonal populations of fluoroquinolone-resistant CTX-M-15-producing Escherichia coli ST410 in humans and animals in Germany. Int J Antimicrob Agents. 2016 Jun;47(6):457-65. doi: 10.1016/j.ijantimicag.2016.03.019. Epub 2016 May 12. PubMed PMID: 27208899.

Prieto A, Urcola I, Blanco J, Dahbi G, Muniesa M, Quirós P, Falgenhauer L, Chakraborty T, Hüttener M, Juárez A. Tracking bacterial virulence: global modulators as indicators. Sci Rep. 2016 May 12;6:25973. doi: 10.1038/srep25973. PubMed PMID: 27169404; PubMed Central PMCID: PMC4864382.

Mshana SE, Falgenhauer L, Mirambo MM, Mushi MF, Moremi N, Julius R, Seni J, Imirzalioglu C, Matee M, Chakraborty T. Predictors of blaCTX-M-15 in varieties of Escherichia coli genotypes from humans in community settings in Mwanza, Tanzania. BMC Infect Dis. 2016 Apr 29;16:187. doi: 10.1186/s12879-016-1527-x. PubMed PMID: 27129719; PubMed Central PMCID: PMC4850702.

Seni J, Falgenhauer L, Simeo N, Mirambo MM, Imirzalioglu C, Matee M, Rweyemamu M, Chakraborty T, Mshana SE. Multiple ESBL-Producing Escherichia coli Sequence Types Carrying Quinolone and Aminoglycoside Resistance Genes Circulating in Companion and Domestic Farm Animals in Mwanza, Tanzania, Harbor Commonly Occurring Plasmids. Front Microbiol. 2016 Feb 11;7:142. doi: 10.3389/fmicb.2016.00142. eCollection 2016. PubMed PMID: 26904015; PubMed Central PMCID: PMC4749707.

Ghosh H, Doijad S, Bunk B, Falgenhauer L, Yao Y, Spröer C, Gentil K, Schmiedel J, Imirzalioglu C, Overmann J, Chakraborty T. Detection of translocatable units in a blaCTX-M-15 extended-spectrum β-lactamase-producing ST131 Escherichia coli isolate using a hybrid sequencing approach. Int J Antimicrob Agents. 2016 Mar;47(3):245-7. doi: 10.1016/j.ijantimicag.2016.01.003. Epub 2016 Feb 1. PubMed PMID: 26899414.

Pillich H, Loose M, Zimmer KP, Chakraborty T. Diverse roles of endoplasmic reticulum stress sensors in bacterial infection. Mol Cell Pediatr. 2016 Dec;3(1):9. doi: 10.1186/s40348-016-0037-7. Epub 2016 Feb 16. PubMed PMID: 26883353; PubMed Central PMCID: PMC4755955.

Falgenhauer L, Waezsada SE, Yao Y, Imirzalioglu C, Käsbohrer A, Roesler U, Michael GB, Schwarz S, Werner G, Kreienbrock L, Chakraborty T; RESET consortium. Colistin resistance gene mcr-1 in extended-spectrum β-lactamase-producing and carbapenemase-producing Gram-negative bacteria in Germany. Lancet Infect Dis. 2016 Mar;16(3):282-3. doi: 10.1016/S1473-3099(16)00009-8. Epub 2016 Jan 8. PubMed PMID: 26774242.

Zhang Z, Wang M, Eisel F, Tchatalbachev S, Chakraborty T, Meinhardt A, Bhushan S. Uropathogenic Escherichia coli Epigenetically Manipulate Host Cell Death Pathways. J Infect Dis. 2016 Apr 1;213(7):1198-207. doi: 10.1093/infdis/jiv569. Epub 2015 Nov 29. PubMed PMID: 26621912.

Kämpfer P, McInroy JA, Doijad S, Chakraborty T, Glaeser SP. Kosakonia pseudosacchari sp. nov., an endophyte of Zea mays. Syst Appl Microbiol. 2016 Feb;39(1):1-7. doi: 10.1016/j.syapm.2015.09.004. Epub 2015 Oct 22. PubMed PMID: 26597455.

Kämpfer P, Doijad S, Chakraborty T, Glaeser SP. The status of the species Enterobacter siamensis Khunthongpan et al. 2014. Request for an Opinion. Int J Syst Evol Microbiol. 2016 Jan;66(1):524-5. doi: 10.1099/ijsem.0.000777. Epub 2015 Nov 17. PubMed PMID: 26581210.

Falgenhauer L, Ghosh H, Guerra B, Yao Y, Fritzenwanker M, Fischer J, Helmuth R, Imirzalioglu C, Chakraborty T. Comparative genome analysis of IncHI2 VIM-1 carbapenemase-encoding plasmids of Escherichia coli and Salmonella enterica isolated from a livestock farm in Germany. Vet Microbiol. 2017 Feb;200:114-117. doi: 10.1016/j.vetmic.2015.09.001. Epub 2015 Sep 9. PubMed PMID: 26411323.

Loose M, Pillich H, Chakraborty T. Fisetin Protects Against Listeria monocytogenes Infection by Reducing the Production of Listeriolysin O. J Infect Dis. 2016 Feb 15;213(4):684-5. doi: 10.1093/infdis/jiv437. Epub 2015 Sep 7. PubMed PMID: 26347572.

Pilatz A, Hudemann C, Wolf J, Halefeld I, Paradowska-Dogan A, Schuppe HC, Hossain H, Jiang Q, Schultheiss D, Renz H, Weidner W, Wagenlehner F, Linn T. Metabolic syndrome and the seminal cytokine network in morbidly obese males. Andrology. 2016 Nov 3. doi: 10.1111/andr.12296.

Benelli A, Hossain H, Pilatz A, Weidner W. Prostatitis and its Management. European Urology Supplements. 2016 Oct; DOI: 10.1016/j.eursup.2016.03.001.

Scherag A, Schöneweck F, Kesselmeier M, Taudien S, Platzer M, Felder M, Sponholz C, Rautanen A, Hill AV, Hinds CJ, Hossain H, Suttorp N, Kurzai O, Slevogt H, Giamarellos-Bourboulis EJ, Armaganidis A, Trips E, Scholz M, Brunkhorst FM. Genetic Factors of the Disease Course after Sepsis: A Genome-Wide Study for 28 Day Mortality. EBioMedicine. 2016 Oct;12:239-246.

Höfer F, Marquardt K, Schmidts T, Domann E, Runkel F. 2016. Design and screening for a DNAzyme to combat biofilm formation of Pseudomonas aeruginosa by an in vitro HPLC cleavage assay. Nucleic Acid Therap.: under revision.

Groeger S, Jarzina F, Domann E, Meyle J. 2016. NFkB and MAPK pathways in antibacterial response of human epithelial cells to infection with Porphyromonas gingivalis. BMC Immunol.: under revision.

Krämer N, Schmidt M, Lücker S, Domann E, Frankenberger R. 2016. Glass ionomer cement inhibits secondary caries in an in vitro biofilm model. Clin. Oral Invest.: under revision.

Boutsiouki C, Lücker S, Domann E, Krämer N. 2016. Kann ein Calcium-Phosphat-Gel die Sekundärkariesentstehung beinflussen? Is calcium-phosphate gel able to inhibit formation of secondary caries? Oralprophylaxe und Kinderzahnheilkunde 38:156-164. doi: 10.3238/OPKZH.2016.0156-0164.

Ulyanova V, Mahmud RS, Dudkina E, Vershinina V, Domann E, Ilinskaya O. Phylogenetic distribution of extracellular guanyl-preferring ribonucleases renews taxonomic status of two Bacillus strains. J. Gen. Appl. Microbiol. 62:181-188. doi: 10.2323/jgam.2016.02.005.

Kuntz S, Kunz C, Domann E, Würdemann N, Unger F, Römpp A, Rudloff S. 2016. Inhibition of low-grade inflammation by anthocyanins after microbial fermentation in vitro. Nutrients 8:411. doi: 10.3390/nu8070411.

Domann E, Fischer F, Glowatzki F, Fritzenwanker M, Hain T, Zechel-Gran S, Giffhorn-Katz S, Neubauer BA. 2016. Draft genome sequence of a Lactobacillus delbrueckii strain #22 isolated from a patient with short bowel syndrome and previous D-lactic acidosis and encephalopathy. Genome Announc. pii: e00747-16. doi: 10.1128/genomeA.00747-16.

Fritzenwanker M, Hain T, Kesper D, Harb H, Renz H, Domann E. 2016. Draft genome sequence and complete plasmid sequence of Acinetobacter lwoffii F78, an isolate with strong allergy-protective properties. Genome Announc. pii: e00685-16. doi: 10.1128/genomeA.00685-16.

Podhorsky A, Putzier S, Rehmann P, Streckbein P, Domann E, Wöstmann B. 2016. Bacterial contamination of the internal cavity of dental implants after application of disinfectant or sealant agents under cyclic loading in vitro. Int. J. Prosthodont. 29:493-495. doi: 10.11607/ijp.4546.

Podhorsky A, Biscoping S, Rehmann P, Streckbein P, Domann E, Wöstmann B. 2016. Transfer of bacteria into the internal cavity of dental implants after application of disinfectant or sealant agents in vivo. Int. J. Oral Maxillofac. Implants 31:563-570. doi: 10.11607/jomi.4408.

Mengel JP, Lissin A, Biedenkopf N, Schultze T, Mannala GK, Schudt G, Kann G, Wolf T, Eickmann M, Becker S, Cemic F, Hain T. Complete Genome Sequence of an Ebola Virus Isolate Imported from Sierra Leone to Germany Determined by Circle Sequencing. Genome Announc. 2016 Oct 6;4(5). pii: e01011-16. doi: 10.1128/genomeA.01011-16.

Wolff S, Schultze T, Fehling SK, Mengel JP, Kann G, Wolf T, Eickmann M, Becker S, Hain T, Strecker T. Genome Sequence of Lassa Virus Isolated from the First Domestically Acquired Case in Germany. Genome Announc. 2016 Sep 22;4(5). pii: e00938-16. doi: 10.1128/genomeA.00938-16.


Schäper S, Krol E, Skotnicka D, Kaever V, Hilker R, Søgaard-Andersen L, Becker A Cyclic di-GMP regulates multiple cellular functions in the symbiotic a-proteobacterium Sinorhizobium meliloti. J Bacteriol., 2015 Nov 16;198(3):521-35. doi: 10.1128/JB.00795-15.

Schultze T, Hilker R, Mannala GK, Gentil K, Weigel M, Farmani N, Windhorst AC, Goesmann A, Chakraborty T, Hain T. A detailed view of the intracellular transcriptome of Listeria monocytogenes in murine macrophages using RNA-seq. Front Microbiol. 2015 Oct 30;6:1199. eCollection 2015. PubMed PMID: 26579105; PubMed Central PMCID: PMC4627465.

Falgenhauer L, Ghosh H, Guerra B, Yao Y, Fritzenwanker M, Fischer J, Helmuth R, Imirzalioglu C, Chakraborty T. Comparative genome analysis of IncHI2 VIM-1 carbapenemase-encoding plasmids of Escherichia coli and Salmonella enterica isolated from a livestock farm in Germany. Vet Microbiol. 2015 Sep 9. pii: S0378-1135(15)30020-1. doi: 10.1016/j.vetmic.2015.09.001. [Epub ahead of print] PubMed PMID: 26411323.

Ryan D, Pati NB, Ojha UK, Padhi C, Ray S, Jaiswal S, Singh GP, Mannala GK, Schultze T, Chakraborty T, Suar M. Global Transcriptome and Mutagenic Analyses of the Acid Tolerance Response of Salmonella enterica Serovar Typhimurium. Appl Environ Microbiol. 2015 Dec 1;81(23):8054-65. doi: 10.1128/AEM.02172-15. Epub 2015 Sep 18. PubMed PMID: 26386064.

Doijad SP, Barbuddhe SB, Garg S, Poharkar KV, Kalorey DR, Kurkure NV, Rawool DB, Chakraborty T. Biofilm-Forming Abilities of Listeria monocytogenes Serotypes Isolated from Different Sources. PLoS One. 2015 Sep 11;10(9):e0137046. doi: 10.1371/journal.pone.0137046. eCollection 2015. PubMed PMID: 26360831; PubMed Central PMCID: PMC4567129.

Doijad S, Weigel M, Barbuddhe S, Blom J, Goesmann A, Hain T, Chakraborty T. Phylogenomic grouping of Listeria monocytogenes. Can J Microbiol. 2015 Sep;61(9):637-46. doi: 10.1139/cjm-2015-0281. Epub 2015 Jun 9. PubMed PMID: 26245135.

Mshana SE, Fritzenwanker M, Falgenhauer L, Domann E, Hain T, Chakraborty T, Imirzalioglu C. Molecular epidemiology and characterization of an outbreak causing Klebsiella pneumoniae clone carrying chromosomally located bla(CTX-M-15) at a German University-Hospital. BMC Microbiol. 2015 Jun 17;15:122. doi: 10.1186/s12866-015-0460-2. PubMed PMID: 26077154; PubMed Central PMCID: PMC4469578.

Sethi S, Thormann U, Sommer U, Stötzel S, Mohamed W, Schnettler R, Domann E, Chakraborty T, Alt V. Impact of prophylactic CpG Oligodeoxynucleotide application on implant-associated Staphylococcus aureus bone infection. Bone. 2015 Sep;78:194-202. doi: 10.1016/j.bone.2015.04.030. Epub 2015 May 8. PubMed PMID: 25959416.

Bhushan S, Tchatalbachev S, Lu Y, Fröhlich S, Fijak M, Vijayan V, Chakraborty T, Meinhardt A. Differential activation of inflammatory pathways in testicular macrophages provides a rationale for their subdued inflammatory capacity. J Immunol. 2015 Jun 1;194(11):5455-64. doi: 10.4049/jimmunol.1401132. Epub 2015 Apr 27. PubMed PMID: 25917085.

Zischka M, Künne CT, Blom J, Wobser D, Sakιnç T, Schmidt-Hohagen K, Dabrowski PW, Nitsche A, Hübner J, Hain T, Chakraborty T, Linke B, Goesmann A, Voget S, Daniel R, Schomburg D, Hauck R, Hafez HM, Tielen P, Jahn D, Solheim M, Sadowy E, Larsen J, Jensen LB, Ruiz-Garbajosa P, Quiñones Pérez D, Mikalsen T, Bender J, Steglich M, Nübel U, Witte W, Werner G. Comprehensive molecular, genomic and phenotypic analysis of a major clone of Enterococcus faecalis MLST ST40. BMC Genomics. 2015 Mar 12;16:175. doi: 10.1186/s12864-015-1367-x. PubMed PMID: 25887115; PubMed Central PMCID: PMC4374294.

Pillich H, Chakraborty T, Mraheil MA. Cell-autonomous responses in Listeria monocytogenes infection. Future Microbiol. 2015;10(4):583-97. doi: 10.2217/fmb.15.4. PubMed PMID: 25865195.

Pilatz A, Hossain H, Kaiser R, Mankertz A, Schüttler CG, Domann E, Schuppe HC, Chakraborty T, Weidner W, Wagenlehner F. Acute epididymitis revisited: impact of molecular diagnostics on etiology and contemporary guideline recommendations. Eur Urol. 2015 Sep;68(3):428-35. doi: 10.1016/j.eururo.2014.12.005. Epub 2014 Dec 24. PubMed PMID: 25542628.

Loose M, Hudel M, Zimmer KP, Garcia E, Hammerschmidt S, Lucas R, Chakraborty T, Pillich H. Pneumococcal hydrogen peroxide-induced stress signaling regulates inflammatory genes. J Infect Dis. 2015 Jan 15;211(2):306-16. doi: 10.1093/infdis/jiu428. Epub 2014 Sep 2. PubMed PMID: 25183769; PubMed Central PMCID: PMC4334831.

Pilatz A, Ceylan I, Schuppe HC, Ludwig M, Fijak M, Chakraborty T, Weidner W, Bergmann M, Wagenlehner F. Experimental Escherichia coli epididymitis in rats: assessment of testicular involvement in a long-term follow-up. Andrologia. 2015 Mar;47(2):160-7. doi: 10.1111/and.12239. Epub 2014 Feb 16. PubMed PMID: 24528296.

Fatykhova D, Rabes A, Machnik C, Guruprasad K, Pache F, Berg J, Toennies M, Bauer TT, Schneider P, Schimek M, Eggeling S, Mitchell TJ, Mitchell AM, Hilker R, Hain T, Suttorp N, Hippenstiel S, Hocke AC, Opitz B. Serotype 1 and 8 Pneumococci Evade Sensing by Inflammasomes in Human Lung Tissue. PloS One, 2015, 10(8), S. e0137108.

Maier LK, Benz J, Fischer S, Alstetter M, JAschinski K, Hilker R, Becker A, Allers T, Soppa J, Marchfelder A. Deletion of the Sm1 encoding motif in the lsm gene result in distinct changes in the transcriptome and enhanced swarming activity of Haloferax cells. Biochimie, 2015. Oct;117:129-37.

Hauri AM*, Kaase M, Hunfeld KP, Heinmüller P, Imirzalioglu C, Wichelhaus TA, Heudorf U, Bremer J, Wirtz A. Meldepflicht für Carbapenem-resistente gramnegative Erreger: eine Public Health-Priorität? Hyg Med 2015; 40 [1/2]: 26–35


Im Druck:

Podhorsky A, Putzier S, Rehmann P, Streckbein P, Domann E, Wöstmann B. 2015. Bacterial contamination of the internal cavity of dental implants after application of disinfectant or sealant agents under cyclic loading in vitro. Int. J. Prosthodont.

Podhorsky A, Biscoping S, Rehmann P, Streckbein P, Domann E, Wöstmann B. 2015. Transfer of bacteria into the internal cavity of dental implants after application of disinfectant or sealant agents in vivo. Int. J. Oral Maxillofac. Implants.

Markmann M, Lang D, Konrad L, Geyer J, Kliesch S, Chakraborty T, Hossain H, Bergmann M. Transfection of Sertoli cells with Androgen Receptor alters gene expression without androgen stimulation. 2015. BMC Molecular Biology -BMMI-D-15-00039R3


Garigliany MM, Hagen RM, Frickmann H, May J, Schwarz NG, Perse A, Jöst H, Börstler J, Shahhosseini N, Desmecht D, Mbunkah HA, Daniel AM, Kingsley MT, Campos Rde M, de Paula VS, Randriamampionona N, Poppert S, Tannich E, Rakotozandrindrainy R, Cadar D, Schmidt-Chanasit J (2014) Cyclovirus CyCV-VN strain distribution is not limited to Vietnam and extends to Africa. Sci Rep 4:7552.

Yao Y, Imirzalioglu C, Hain T, Kaase M, Gatermann S, Exner M, Mielke M, Hauri A, Dragneva Y, Bill R, Wendt C, Wirtz A, Domann E, Chakraborty T (2014) Complete Nucleotide Sequence of a Citrobacter freundii Plasmid Carrying KPC-2 in a Unique Genetic Environment. Genome Announc 2(6).

Mohamed W, Sommer U, Sethi S, Domann E, Thormann U, Schütz I, Lips KS, Chakraborty T, Schnettler R, Alt V (2014) Intracellular proliferation of S. aureus in osteoblasts and effects of rifampicin and gentamicin on S. aureus intracellular proliferation and survival. Eur Cell Mater 28:258-68.

Wehner S, Mannala GK, Qing X, Madhugiri R, Chakraborty T, Mraheil MA, Hain T, Marz M (2014) Detection of Very Long Antisense Transcripts by Whole Transcriptome RNA-Seq Analysis of Listeria monocytogenes by Semiconductor Sequencing Technology. PLoS One 9(10):e108639.

Valentin L, Sharp H, Hille K, Seibt U, Fischer J, Pfeifer Y, Michael GB, Nickel S, Schmiedel J, Falgenhauer L, Friese A, Bauerfeind R, Roesler U, Imirzalioglu C, Chakraborty T, Helmuth R, Valenza G, Werner G, Schwarz S, Guerra B, Appel B, Kreienbrock L, Käsbohrer A (2014) Subgrouping of ESBL-producing Escherichia coli from animal and human sources: An approach to quantify the distribution of ESBL types between different reservoirs. Int J Med Microbiol 304:805-16.

Kraemer TD, Quintanar Haro OD, Domann E, Chakraborty T, Tchatalbachev S (2014) The TIR Domain Containing Locus of Enterococcus faecalis Is Predominant among Urinary Tract Infection Isolates and Downregulates Host Inflammatory Response. Int J Microbiol 2014:918143.

Czikora I, Sridhar S, Gorshkov B, Alieva IB, Kasa A, Gonzales J, Potapenko O, Umapathy NS, Pillich H, Rick FG, Block NL, Verin AD, Chakraborty T, Matthay MA, Schally AV, Lucas R (2014) Protective effect of Growth Hormone-Releasing Hormone agonist in bacterial toxin-induced pulmonary barrier dysfunction. Front Physiol 5:259.

Halbedel S, Reiss S, Hahn B, Albrecht D, Mannala GK, Chakraborty T, Hain T, Engelmann S, Flieger A (2014) A Systematic Proteomic Analysis of Listeria monocytogenes House-keeping Protein Secretion Systems. Mol Cell Proteomics 13:3063-81.

Schmiedel J, Falgenhauer L, Domann E, Bauerfeind R, Prenger-Berninghoff E, Imirzalioglu C, Chakraborty T (2014) Multiresistant extended-spectrum β-lactamase-producing Enterobacteriaceae from humans, companion animals and horses in central Hesse, Germany. BMC Microbiol 14:187.

Chen F, Kumar S, Yu Y, Aggarwal S, Gross C, Wang Y, Chakraborty T, Verin AD, Catravas JD, Lucas R, Black SM, Fulton DJ (2014) PKC-dependent phosphorylation of eNOS at T495 regulates eNOS coupling and endothelial barrier function in response to G+ -toxins. PLoS One 9:e99823.

Falgenhauer L, Yao Y, Fritzenwanker M, Schmiedel J, Imirzalioglu C, Chakraborty T (2014) Complete Genome Sequence of Phage-Like Plasmid pECOH89, Encoding CTX-M-15. Genome Announc 2(2).

Köster S, van Pee K, Hudel M, Leustik M, Rhinow D, Kühlbrandt W, Chakraborty T, Yildiz Ö (2014) Crystal structure of listeriolysin O reveals molecular details of oligomerization and pore formation. Nat Commun 5:3690.

Imirzalioglu C, Sethi S, Schneider C, Hain T, Chakraborty T, Mayser P, Domann E (2014) Distinct polymicrobial populations in a chronic foot ulcer with implications for diagnostics and anti-infective therapy. BMC Res Notes 7:196.

Weinandy F, Lorenz-Baath K, Korotkov VS, Böttcher T, Sethi S, Chakraborty T, Sieber SA (2014) A β-lactone-based antivirulence drug ameliorates Staphylococcus aureus skin infections in mice. ChemMedChem 9:710-3.

Kunze K, Gamerdinger U, Leßig-Owlanj J, Sorokina M, Brobeil A, Tur MK, Blau W, Burchardt A, Käbisch A, Schliesser G, Kiehl M, Rosenwald A, Rummel M, Grimminger F, Hain T, Chakraborty T, Bräuninger A, Gattenlöhner S (2014) Detection of an activated JAK3 variant and a Xq26.3 microdeletion causing loss of PHF6 and miR-424 expression in myelodysplastic syndromes by combined targeted next generation sequencing and SNP array analysis. Pathol Res Pract 210:369-76.

Bécavin C, Bouchier C, Lechat P, Archambaud C, Creno S, Gouin E, Wu Z, Kühbacher A, Brisse S, Pucciarelli MG, García-del Portillo F, Hain T, Portnoy DA, Chakraborty T, Lecuit M, Pizarro-Cerdá J, Moszer I, Bierne H, Cossart P (2014) Comparison of widely used Listeria monocytogenes strains EGD, 10403S, and EGD-e highlights genomic variations underlying differences in pathogenicity. MBio 5:e00969-14.

Lang T, Hudemann C, Tchatalbachev S, Stammler A, Michel V, Aslani F, Bhushan S, Chakraborty T, Renz H, Meinhardt A (2014) Uropathogenic Escherichia coli modulates innate immunity to suppress Th1-mediated inflammatory responses during infectious epididymitis. Infect Immun 82:1104-11.

Niño-Castro A, Abdullah Z, Popov A, Thabet Y, Beyer M, Knolle P, Domann E, Chakraborty T, Schmidt SV, Schultze JL (2014) The IDO1-induced kynurenines play a major role in the antimicrobial effect of human myeloid cells against Listeria monocytogenes. Innate Immun 20:401-11.

Hille K, Fischer J, Falgenhauer L, Sharp H, Brenner M, Kadlec K, Friese A, Schwarz S, Imirzalioglu C, Kietzmann M, von Münchhausen C, Kreienbrock L (2014) Zum Vorkommen von Extended-Spektrum- und AmpC-Beta-Laktamase-produzierenden Escherichia coli in Nutztierbeständen: Ergebnisse ausgewählter europäischer Studien. Berl Münch Tierärztl Wochenschr 127, 403–411.

Falgenhauer L, Judith Schmiedel J, Ghosh H, Fritzenwanker M, Yao Y, Bauerfeind R, Imirzalioglu C, Chakraborty T (2014) Resistance plasmids in ESBL-encoding Escherichia coli isolates from humans, dogs and cats. Berl Münch Tierärztl Wochenschr 127, 458–463.



Köster S, Hudel M, Chakraborty T, Yildiz O (2013) Crystallization and X-ray crystallographic analysis of the cholesterol-dependent cytolysin listeriolysin O from Listeria monocytogenes  Acta Crystallogr Sect F Struct Biol Cryst Commun 69(Pt 11):1212-5.

Patenge N, Pappesch R, Krawack F, Walda C, Mraheil MA, Jacob A, Hain T, Kreikemeyer B (2013) Inhibition of Growth and Gene Expression by PNA-peptide Conjugates in Streptococcus pyogenes. Mol Ther Nucleic Acids 2:e132.

Abu Mraheil M, Heisig A, Heisig P (2013) An improved assay for the detection of alterations in bacterial DNA supercoiling in vivo. Pharmazie 68:541-8.

Wagenlehner F, Pilatz A, Linn T, Diemer T, Schuppe HC, Schagdarsurengin U, Hossain H, Meinhardt A, Ellem S, Risbridger G, Weidner W (2013) Prostatitis and andrological implications. Minerva Urol Nefrol 65:117-23.

Gruber I, Heudorf U, Werner G, Pfeifer Y, Imirzalioglu C, Ackermann H, Brandt C, Besier S, Wichelhaus TA (2013) Multidrug-resistant bacteria in geriatric clinics, nursing homes, and ambulant care - Prevalence and risk factors. Int J Microbiol 303:405-9.

Mshana SE, Hain T, Domann E, Lyamuya EF, Chakraborty T, Imirzalioglu C (2013) Predominance of Klebsiella pneumoniae ST14 carrying CTX-M-15 causing neonatal sepsis in Tanzania. BMC Infect Dis 13:466.

Atanasova S, Hirschburger M, Jonigk D, Obert M, Petri K, Evers A, Hecker A, Schmitz J, Kaufmann A, Wilhelm J, Chakraborty T, Warnecke G, Gottlieb J, Padberg W, Grau V (2013) A relevant experimental model for human bronchiolitis obliterans syndrome. J Heart Lung Transplant 32:1131-9.

Lucas R, Czikora I, Sridhar S, Zemskov EA, Oseghale A, Circo S, Cederbaum SD, Chakraborty T, Fulton DJ, Caldwell RW, Romero MJ (2013) Arginase 1: an unexpected mediator of pulmonary capillary barrier dysfunction in models of acute lung injury. Front Immunol 4:228.

Lucas R, Czikora I, Sridhar S, Zemskov E, Gorshkov B, Siddaramappa U, Oseghale A, Lawson J, Verin A, Rick FG, Block NL, Pillich H, Romero M, Leustik M, Schally AV, Chakraborty T (2013) Mini-review: novel therapeutic strategies to blunt actions of pneumolysin in the lungs. Toxins (Basel) 5:1244-60.

Lang T, Dechant M, Sanchez V, Wistuba J, Boiani M, Pilatz A, Stammler A, Middendorff R, Schuler G, Bhushan S, Tchatalbachev S, Wübbeling F, Burger M, Chakraborty T, Mallidis C, Meinhardt A (2013) Structural and functional integrity of spermatozoa is compromised as a consequence of acute uropathogenic E. coli-associated epididymitis. Biol Reprod 89:59.

Sethi S, Nanda R, Chakraborty T (2013) Clinical application of volatile organic compound analysis for detecting infectious diseases. Clin Microbiol Rev 26:462-75.

Quereda JJ, Pucciarelli MG, Botello-Morte L, Calvo E, Carvalho F, Bouchier C, Vieira A, Mariscotti JF, Chakraborty T, Cossart P, Hain T, Cabanes D, García-Del Portillo F (2013) Occurrence of mutations impairing sigma factor B (SigB) function upon inactivation of Listeria monocytogenes genes encoding surface proteins. Microbiology 159:1328-39.

Fritzenwanker M, Kuenne C, Billion A, Hain T, Zimmermann K, Goesmann A, Chakraborty T, Domann E (2013) Complete Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clone DSM 16431. Genome Announc 1(1).

Mukherjee K, Hain T, Fischer R, Chakraborty T, Vilcinskas A (2013) Brain infection and activation of neuronal repair mechanisms by the human pathogen Listeria monocytogenes in the lepidopteran model host Galleria mellonella. Virulence 4:324-32.

Kuenne C, Billion A, Mraheil MA, Strittmatter A, Daniel R, Goesmann A, Barbuddhe S, Hain T, Chakraborty T (2013) Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome. BMC Genomics 14:47.

Lu Y, Bhushan S, Tchatalbachev S, Marconi M, Bergmann M, Weidner W, Chakraborty T, Meinhardt A (2013) Necrosis is the dominant cell death pathway in uropathogenic Escherichia coli elicited epididymo-orchitis and is responsible for damage of rat testis. PLoS One 8:e52919.


Abdullah Z, Schlee M, Roth S, Mraheil MA, Barchet W, Böttcher J, Hain T, Geiger S, Hayakawa Y, Fritz JH, Civril F, Hopfner KP, Kurts C, Ruland J, Hartmann G, Chakraborty T, Knolle PA (2012) RIG-I detects infection with live Listeria by sensing secreted bacterial nucleic acids. EMBO J 31:4153-64.

Pischimarov J, Kuenne C, Billion A, Hemberger J, Cemič F, Chakraborty T, Hain T (2012) sRNAdb: a small non-coding RNA database for gram-positive bacteria. BMC Genomics 13:384.

Giese S, Hossain H, Markmann M, Chakraborty T, Tchatalbachev S, Guillou F, Bergmann M, Failing K, Weider K, Brehm R (2012) Sertoli-cell-specific knockout of connexin 43 leads to multiple alterations in testicular gene expression in prepubertal mice. Dis Model Mech 5:895-913.

Abdullah Z, Geiger S, Nino-Castro A, Böttcher JP, Muraliv E, Gaidt M, Schildberg FA, Riethausen K, Flossdorf J, Krebs W, Chakraborty T, Kurts C, Schultze JL, Knolle PA, Klotz L (2012) Lack of PPARγ in myeloid cells confers resistance to Listeria monocytogenes infection. PLoS One 7:e37349.

Lucas R, Yang G, Gorshkov BA, Zemskov EA, Sridhar S, Umapathy NS, Jezierska-Drutel A, Alieva IB, Leustik M, Hossain H, Fischer B, Catravas JD, Verin AD, Pittet JF, Caldwell RB, Mitchell TJ, Cederbaum SD, Fulton DJ, Matthay MA, Caldwell RW, Romero MJ, Chakraborty T (2012) Protein kinase C-α and arginase I mediate pneumolysin-induced pulmonary endothelial hyperpermeability. Am J Respir Cell Mol Biol 47:445-53.

Mohamed W, Sethi S, Tchatalbachev S, Darji A, Chakraborty T (2012). Protective immunity to Listeria monocytogenes infection mediated by recombinant Listeria innocua harboring the VGC locus. PLoS One 7:e35503.

Hain T, Ghai R, Billion A, Kuenne CT, Steinweg C, Izar B, Mohamed W, Mraheil MA, Domann E, Schaffrath S, Kärst U, Goesmann A, Oehm S, Pühler A, Merkl R, Vorwerk S, Glaser P, Garrido P, Rusniok C, Buchrieser C, Goebel W, Chakraborty T (2012) Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes. BMC Genomics13:144.

Pillich H, Loose M, Zimmer KP, Chakraborty T (2012) Activation of the unfolded protein response by Listeria monocytogenes. Cell Microbiol 14:949-64.

Izar B, Mannala GK, Mraheil MA, Chakraborty T, Hain T (2012) microRNA Response to Listeria monocytogenes Infection in Epithelial Cells. Int J Mol Sci (1):1173-85.

Lucas R, Sridhar S, Rick FG, Gorshkov B, Umapathy NS, Yang G, Oseghale A, Verin AD, Chakraborty T, Matthay MA, Zemskov EA, White R, Block NL, Schally AV (2012) Agonist of growth hormone-releasing hormone reduces pneumolysin-induced pulmonary permeability edema. Proc Natl Acad Sci U S A 109:2084-9.

Künne C, Billion A, Mshana SE, Schmiedel J, Domann E, Hossain H, Hain T, Imirzalioglu C, Chakraborty T (2012) Complete sequences of plasmids from the hemolytic-uremic syndrome-associated Escherichia coli strain HUSEC41. J Bacteriol 194:532-3.

Barbuddhe SB, Malik SV, Kumar JA, Kalorey DR, Chakraborty T (2012) Epidemiology and risk management of listeriosis in India. Int J Food Microbiol 154:113-8.

Zischka M, Kuenne C, Blom J, Dabrowski PW, Linke B, Hain T, Nitsche A, Goesmann A, Larsen J, Jensen LB, Witte W, Werner G (2012) Complete genome sequence of the porcine isolate Enterococcus faecalis D32. J Bacteriol 194:5490-1.

Patenge N, Billion A, Raasch P, Normann J, Wisniewska-Kucper A, Retey J, Boisguérin V, Hartsch T, Hain T, Kreikemeyer B (2012) Identification of novel growth phase- and media-dependent small non-coding RNAs in Streptococcus pyogenes M49 using intergenic tiling arrays. BMC Genomics 13:550.

Füssle, R (2012) CME-Beitrag: Invasive Pilzinfektionen bei kritisch kranken Patienten. Anästhesiologie und Intensivmedizin 53: 523-536.

Xiao Y, Karnati S, Qian G, Nenicu A, Fan W, Tchatalbachev S, Höland A, Hossain H, Guillou F, Lüers GH, Baumgart-Vogt E (2012) Cre-mediated stress affects sirtuin expression levels, peroxisome biogenesis and metabolism, antioxidant and proinflammatory signaling pathways. PLoS One 7:e41097.


Buchrieser C, Rusniok C, Garrido P, Hain T, Scortti M, Lampidis R, Kärst U, Chakraborty T, Cossart P, Kreft J, Vazquez-Boland JA, Goebel W, Glaser P (2011) Complete Genome Sequence of the Animal Pathogen Listeria ivanovii, Which Provides Insights into Host Specificities and Evolution of the Genus Listeria. J Bacteriol 193:6787-8.

Seifart Gomes C, Izar B, Pazan F, Mohamed W, Mraheil MA, Mukherjee K, Billion A, Aharonowitz Y, Chakraborty T, Hain T (2011) Universal stress proteins are important for oxidative and acid stress resistance and growth of Listeria monocytogenes EGD-e in vitro and in vivo. PLoS One 6:e24965.

Kalekar S, Rodrigues J, D'Costa D, Doijad S, Ashok Kumar J, Malik SV, Kalorey DR, Rawool DB, Hain T, Chakraborty T, Barbuddhe SB (2011) Genotypic characterization of Listeria monocytogenes isolated from humans in India. Ann Trop Med Parasitol 105:351-8.

Bücker R, Krug SM, Rosenthal R, Günzel D, Fromm A, Zeitz M, Chakraborty T, Fromm M, Epple HJ, Schulzke JD (2011) Aerolysin from Aeromonas hydrophila perturbs tight junction integrity and cell lesion repair in intestinal epithelial HT-29/B6 cells. J Infect Dis 204:1283-92.

Shioya K, Michaux C, Kuenne C, Hain T, Verneuil N, Budin-Verneuil A, Hartsch T, Hartke A, Giard JC (2011) Genome-wide identification of small RNAs in the opportunistic pathogen Enterococcus faecalis V583. PLoS One 6:e23948.

Izar B, Mraheil MA, Hain T (2011) Identification and Role of Regulatory Non-Coding RNAs in Listeria monocytogenes. Int J Mol Sci 12:5070-9.

Sethi S, Chakraborty T (2011) Role of TLR- / NLR-signaling and the associated cytokines involved in recruitment of neutrophils in murine models of Staphylococcus aureus infection. Virulence 2:316-28.

Mshana SE, Gerwing L, Minde M, Hain T, Domann E, Lyamuya E, Chakraborty T, Imirzalioglu C (2011) Outbreak of a novel Enterobacter sp. carrying blaCTX-M-15 in a neonatal unit of a tertiary care hospital in Tanzania. Int J Antimicrob Agents 38:265-9.

Mawalla B, Mshana SE, Chalya PL, Imirzalioglu C, Mahalu W* (2011) Predictors of surgical site infections among patients undergoing major surgery at Bugando Medical Centre in Northwestern Tanzania. BMC Surg 11:21.

Groeger S, Domann E, Gonzales JR, Chakraborty T, Meyle J (2011) B7-H1 and B7-DC receptors of oral squamous carcinoma cells are upregulated by Porphyromonas gingivalis. Immunobiology. 216:1302-10.

Mraheil MA, Billion A, Mohamed W, Rawool D, Hain T, Chakraborty T (2011) Adaptation of Listeria monocytogenes to oxidative and nitrosative stress in IFN-γ-activated macrophages. Int J Med Microbiol 301:547-55.

Mshana SE, Imirzalioglu C, Hain T, Domann E, Lyamuya EF, Chakraborty T (2011) Multiple ST clonal complexes, with a predominance of ST131, of Escherichia coli harbouring blaCTX-M-15 in a tertiary hospital in Tanzania. Clin Microbiol Infect 17:1279-82.

Mukherjee K, Abu Mraheil M, Silva S, Müller D, Cemic F, Hemberger J, Hain T, Vilcinskas A, Chakraborty T (2011) Anti-Listeria activities of Galleria mellonella hemolymph proteins. Appl Environ Microbiol 77:4237-40.

Krawitz C, Mraheil MA, Stein M, Imirzalioglu C, Domann E, Pleschka S, Hain T* (2011) Inhibitory activity of a standardized elderberry liquid extract against clinically-relevant human respiratory bacterial pathogens and influenza A and B viruses. BMC Complement Altern Med 11:16.

Arif M, Rajpoot NM, Nattkemper TW, Technow U, Chakraborty T, Fisch N, Jensen NA, Niehaus K (2011) Quantification of cell infection caused by Listeria monocytogenes invasion J Biotechnol 154:76-83.

Gonzales JR, Harnack L, Schmitt-Corsitto G, Boedeker RH, Chakraborty T, Domann E, Meyle J (2011) A novel approach to the use of subgingival controlled-release chlorhexidine delivery in chronic periodontitis: a randomized clinical trial. J Periodontol 82:1131-9.

Imirzalioglu C, Dahmen H, Hain T, Billion A, Kuenne C, Chakraborty T, Domann E (2011) Highly specific and quick detection of Mycobacterium avium subsp. paratuberculosis in feces and gut tissue of cattle and humans by multiple real-time PCR assays. J Clin Microbiol 49:1843-52.

Mraheil MA, Billion A, Mohamed W, Mukherjee K, Kuenne C, Pischimarov J, Krawitz C, Retey J, Hartsch T, Chakraborty T, Hain T (2011) The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages. Nucleic Acids Res 39:4235-48.

Ogawa M, Yoshikawa Y, Mimuro H, Hain T, Chakraborty T, Sasakawa C (2011) Autophagy targeting of Listeria monocytogenes and the bacterial countermeasure. Autophagy 7:310-4.


Yang G, Hamacher J, Gorshkov B, White R, Sridhar S, Verin A, Chakraborty T, Lucas R (2010) The Dual Role of TNF in Pulmonary Edema. J Cardiovasc Dis Res 1, 29-36.

Imirzalioglu C, Hain T, Hossain H, Chakraborty T, Domann E (2010) Erythema caused by a localised skin infection with Arthrobacter mysorens. BMC Infect Dis 10, 352.

Groeger S, Doman E, Chakraborty T, Meyle J (2010) Effects of Porphyromonas gingivalis infection on human gingival epithelial barrier function in vitro. Eur J Oral Sci 118, 582-9.

Tchatalbachev S, Ghai R, Hossain H, Chakraborty T (2010) Gram-positive pathogenic bacteria induce a common early response in human monocytes. BMC Microbiol 10, 275.

Kuenne C, Voget S, Pischimarov J, Oehm S, Goesmann A, Daniel R, Hain T, Chakraborty T (2010) Comparative analysis of plasmids in the genus Listeria. PLoS One 5, e12511.

Mohamed W, Sethi S, Darji A, Mraheil MA, Hain T, Chakraborty T (2010) Antibody targeting the ferritin-like protein controls Listeria infection. Infect Immun 78, 3306-14.

Hamacher J, Stammberger U, Roux J, Kumar S, Yang G, Xiong C, Schmid RA, Fakin RM, Chakraborty T, Hossain HM, Pittet JF, Wendel A, Black SM, Lucas R (2010) The lectin-like domain of tumor necrosis factor improves lung function after rat lung transplantation--potential role for a reduction in reactive oxygen species generation. Crit Care Med 38, 871-8.

Xiong C, Yang G, Kumar S, Aggarwal S, Leustik M, Snead C, Hamacher J, Fischer B, Umapathy NS, Hossain H, Wendel A, Catravas JD, Verin AD, Fulton D, Black SM, Chakraborty T, Lucas R. (2010) The lectin-like domain of TNF protects from listeriolysin-induced hyperpermeability in human pulmonary microvascular endothelial cells - a crucial role for protein kinase C-alpha inhibition. Vascul Pharmacol 52, 207-13.

Steinweg C, Kuenne CT, Billion A, Mraheil MA, Domann E, Ghai R, Barbuddhe SB, Kärst U, Goesmann A, Pühler A, Weisshaar B, Wehland J, Lampidis R, Kreft J, Goebel W, Chakraborty T, Hain T (2010) Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria. J Bacteriol 192, 1473-4.

Khalilpour P, Lampe K, Wagener M, Stigler B, Heiss C, Ullrich MS, Domann E, Schnettler R, Alt V (2010) Ag/SiO(x)C(y) plasma polymer coating for antimicrobial protection of fracture fixation devices. J Biomed Mater Res B Appl Biomater 94:196-202.

Umapathy NS, Zemskov EA, Gonzales J, Gorshkov BA, Sridhar S, Chakraborty T, Lucas R, Verin AD (2010) Extracellular beta-nicotinamide adenine dinucleotide (beta-NAD) promotes the endothelial cell barrier integrity via PKA- and EPAC1/Rac1-dependent actin cytoskeleton rearrangement. J Cell Physiol 223, 215-23.

Meixenberger K, Pache F, Eitel J, Schmeck B, Hippenstiel S, Slevogt H, N'Guessan P, Witzenrath M, Netea MG, Chakraborty T, Suttorp N, Opitz B (2010) Listeria monocytogenes-infected human peripheral blood mononuclear cells produce IL-1beta, depending on listeriolysin O and NLRP3. J Immunol 184, 922-30.

Mukherjee K, Altincicek B, Hain T, Domann E, Vilcinskas A, Chakraborty T (2010) Galleria mellonella as a model system for studying Listeria pathogenesis. Appl Environ Microbiol 76, 310-7.

Lichtenstern C, Swoboda S, Hirschburger M, Domann E, Hoppe-Tichy T, Winkler M, Lass-Flörl C, Weigand MA (2010) [Update: invasive fungal infections: Diagnosis and treatment in surgical intensive care medicine]. Anaesthesist 59:30-52.


Hilgendorff A, Heidinger K, Bohnert A, Kleinsteiber A, König IR, Ziegler A, Lindner U, Frey G, Merz C, Lettgen B, Chakraborty T, Gortner L, Bein G (2009) Association of polymorphisms in the human surfactant protein-D (SFTPD) gene and postnatal pulmonary adaptation in the preterm infant. Acta Paediatr 98:112-7.

Bhushan S, Schuppe HC, Tchatalbachev S, Fijak M, Weidner W, Chakraborty T, Meinhardt A (2009) Testicular innate immune defense against bacteria. Mol Cell Endocrinol 306:37-44. Review.

Kleemann P, Domann E, Chakraborty T, Bernstein I, Lohoff M. Chronic prosthetic joint infection caused by Listeria monocytogenes (2009) J Med Microbiol 58:138-41.

Kilian O, Hossain H, Flesch I, Sommer U, Nolting H, Chakraborty T, Schnettler R (2009) Elution kinetics, antimicrobial efficacy, and degradation and microvasculature of a new gentamicin-loaded collagen fleece. J Biomed Mater Res B Appl Biomater 90:210-22.

Ogawa M, Nakagawa I, Yoshikawa Y, Hain T, Chakraborty T, Sasakawa C (2009) Streptococcus-, Shigella-, and Listeria-induced autophagy. Methods Enzymol 452:363-81.

Bigot A, Raynaud C, Dubail I, Dupuis M, Hossain H, Hain T, Chakraborty T, Charbit A (2009) lmo1273, a novel gene involved in Listeria monocytogenes virulence. Microbiology 155:891-902.

Mshana SE, Kamugisha E, Mirambo M, Chakraborty T, Lyamuya EF (2009) Prevalence of multiresistant gram-negative organisms in a tertiary hospital in Mwanza, Tanzania. BMC Res Notes 2:49.

Richter JF, Gitter AH, Günzel D, Weiss S, Mohamed W, Chakraborty T, Fromm M, Schulzke JD (2009) Listeriolysin O affects barrier function and induces chloride secretion in HT-29/B6 colon epithelial cells. Am J Physiol Gastrointest Liver Physiol 296:G1350-9.

Mshana SE, Imirzalioglu C, Hossain H, Hain T, Domann E, Chakraborty T (2009) Conjugative IncFI plasmids carrying CTX-M-15 among Escherichia coli ESBL producing isolates at a University hospital in Germany. BMC Infect Dis 9:97.

Yoshikawa Y, Ogawa M, Hain T, Yoshida M, Fukumatsu M, Kim M, Mimuro H, Nakagawa I, Yanagawa T, Ishii T, Kakizuka A, Sztul E, Chakraborty T, Sasakawa C (2009) Listeria monocytogenes ActA-mediated escape from autophagic recognition. Nat Cell Biol 11:1233-40.

Nestler U, Rollnik S, Schulz C, Chakraborty T, Domann E, Hain T (2009) Expression of the reporter genes lacZ and EGFP in human glioblastoma cells using Listeria monocytogenes as vector for gene transfer. Neurol Res 31:859-68.

Barbuddhe SB, Chakraborty T (2009) Listeria as an enteroinvasive gastrointestinal pathogen Curr Top Microbiol Immunol 337:173-95.

Langefeld T, Mohamed W, Ghai R, Chakraborty T (2009) Toll-like receptors and NOD-like receptors: domain architecture and cellular signaling. Adv Exp Med Biol 653:48-57.

Yoshikawa Y, Ogawa M, Hain T, Chakraborty T, Sasakawa C (2009) Listeria monocytogenes ActA is a key player in evading autophagic recognition. Autophagy 5:1220-1.

Mshana SE, Imirzalioglu C, Domann E, Chakraborty T (2009) The usefulness of microscopic observation for drug susceptibility of Mycobacterium tuberculosis complex in routine clinical microbiology laboratory. Tanzania J Health Res 11.