Inhaltspezifische Aktionen

Team Members

Principle Investigator
Prof. Dr. Stefan Janssen ORCID iD icon

Heinrich-Buff-Ring 58

Room: 56

Phone: +49 (0)641 99 35-822

Administration
Secretary: Anette Inka Mündelein

Heinrich-Buff-Ring 58

Room: 57

Phone: +49 (0)641 99 35-823

Graduate Students
Katharina Maibach, M.Sc.

Pareto optimal RNA secondary structure prediction algorithms.

Heinrich-Buff-Ring 58

Room: 55

Phone: +49 (0)641 99 35-824
Anna Rehm, M.Sc.

NFDI4Microbiota, Task Area 3, which is dedicated to implementing the services for data access and analyses intended for the microbiology community. The final goal being to make research more standardized and reproducible.

Heinrich-Buff-Ring 58

Room: 55

Phone: +49 (0)641 99 35-824
Timo Lin, M.Sc. ORCID iD icon

Microbial shifts and cytokine pattern in children undergoing chemotherapy for acute lymphoblastic leukemia (ALL).

Heinrich-Buff-Ring 58

Room: 55

Phone: +49 (0)641 99 35-824

Students
Inès Schönhaar, B.Sc.

W-elements in Schistosoma mansoni. Co-supervised by Christoph Grevelding.

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432
Julian Andreas Selke, B.Sc.

The fungal microbiome of Conyza canadensis - Perspectives on invasions in dry vs. mesic environments. Co-supervised by Christoph Rosche.

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432
Van Nguyen-Hoang, B.Sc.

Structural RNAs in Exome data.

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432
Marcel Neuenhoff, B.Sc.

Hospitalized patients poop: A risk for our environment? Co-supervised by Claudio Neidhoefer.

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432

Student Assistants
Jonathan Scharle, B.Sc.

NFDI4Microbiota: Metadata-Dialogue

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432

Lab rotations
Johannes Groos, B.Sc.

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432
Noah Stuertz, B.Sc.

Ubuntu Package for fold-grammars software

Heinrich-Buff-Ring 58

Room: 0055.A

Phone: +49 (0)641 99 35-432

Alumni

  • Master Students
    • Timo Bäuerlein, B.Sc. (2022/11 - , Microbiome and Myocardial Infarction: influence of low oxygen saturation on the regenerative capacity of dead heart tissue)
    • Cäcilia Werth (2022/03 - 2022/09, Investigation of dysbiosis in mice with tuft cell deficit, supervised by Torsten Hain)
    • Timo Wollhöver (2020/09 - 2022/01, Dimensionale Reduktion - Evaluierung aktueller Algorithmen der Dimensionsreduktion anhand von Mikrobiom Datensätzen.)
    • Anna Rehm (2021/09 - 2022/01, Einfluss des genetischen Hintergrunds auf die Komposition und Diversität des murinen bakteriellen Mikrobioms über fünf Generationen, co-supervised by Laurentiu Benga)
    • Katrin Bauer (2021/04 - 2022/01, Sex-differences in the gut microbiome of patients with cardiovascular disease (CVD), co-supervised by Ulrike Loeber)
    • Jan C. Keller (2020/03 - 2021/12, Expansion and evalutation of the software tool ReferenceSeeker towards the determination of reference genomes for bacterial cohort studies, co-supervised by Oliver Schwengers)
    • Sonja Diedrich (2021/04 - 2021/09, Benchmarking Metatranscriptomic Assemblers, co-supervised by Sebastian Jaenicke)
    • Matthias Beck, B.Sc. (2022/09 - , Microgravity: The effects of long-term bed rest on the human gut microbiome. Co-superwised by Anna Rehm.)
    • Franziska Daumüller, B.Sc. (2022/06 -, Mycomatics: fungal RNAseq and genome annotation)
    • Hannah-Sophie Zienert, B.Sc. (2022/09 - , AI to predict Leukemia. Co-supervised by Anna Rehm.)
    • Guiraud Tresor Tonou Fotso, M.Sc. (2022/05 - 2022/10, Trait-based community assembly and succession of the infant gut microbiome, co-supervised by Anna Rehm)
    • Fynn Mürmanns, B.Sc. (2023/01 - , Speed-Up RNA prediction. Co-supervised by Katharina Maibach.)
  • Student Assistants
    • Leon Metzger (2021/04 - 2021/06 and 2022/01 - 2022/07, Bellman's Cafe)
    • Jasmin Walter (2022/01 - 2022/05, Front end for RNAhybrid)
    • Felix Keller (2020/03 - 2020/12, House keeping of gapc)
    • Lukas D. Frey (2021/10 - 2022/02, Bellman's Cafe)
    • Clara Kilian, M.Sc. (2021/06 - 2022/12, Identification and characterization of Long COVID-19 patients by whole blood transcriptomics.)
  • Bachelor Students
    • Johannes Groos (2022/07 - 2022/08, Identifying the variable 16S regions via readmapping of the raw sequencedata, co-supervised by Anna Rehm)
    • Belinda Rougeault (2020/07 - 2020/09, Characterizing underrepresented clades in reference phylogenies via massive amplicon fragment insertion, co-supervised by Katharina Maibach)
  • Lab rotations
    • Hanna-Sophie Zienert, B.Sc. (2022/06 - 2022/07)
    • Johannes Groos (2022/06)
    • Julian Andreas Selke (2021/11 - 2022/01)
    • Max Pfister (2021/11 - 2021/12)
    • Jasmin Walter (2021/11 - 2021/12)
    • Nora Baumann (2021/01 - 2021/02)
    • Clara Kilian (2020/11 - 2021/01)
    • Anna Rehm (2020/10 - 2020/12)
    • Lukas Hunold (2022/10 - 2022/12, Data mining RNAloops.)
    • Jonathan Scharle (2023/06 -, Childhood Microbiome Atlas. Co-supervised by Anna Rehm.)
  • Interns

New to the team?

Please have a look at our onboarding guide.