Latest 30 Publications

Jähne, J., Le Thi, T., Blumenscheit, C., Schneider, A., Pham, T., Le Thi, P., Blom, J., Vater, J., Schweder, T., Lasch, P., others. (2023). Novel Plant-Associated Brevibacillus and Lysinibacillus Genomospecies Harbor a Rich Biosynthetic Potential of Antimicrobial Compounds. Multidisciplinary Digital Publishing Institute.Volume 11(1), 168.

Pulami, D., Schwabe, L., Blom, J., Schwengers, O., Wilharm, G., Kämpfer, P., Glaeser, S.. (2023). Genomic plasticity and adaptive capacity of the quaternary alkyl-ammonium compound and copper tolerant Acinetobacter bohemicus strain QAC-21b isolated from pig manure. Springer International Publishing.

Berckx, F., Nguyen, T., Bandong, C., Lin, H., Yamanaka, T., Katayama, S., Wibberg, D., Blom, J., Kalinowski, J., Tateno, M., others. (2022). A tale of two lineages: how the strains of the earliest divergent symbiotic Frankia clade spread over the world. BioMed Central London.Volume 23(1), 602.

Eisenberg, T., Mühldorfer, K., Erhard, M., Fawzy, A., Kehm, S., Ewers, C., Semmler, T., Blom, J., Lipski, A., Rau, J., others. (2022). Erysipelothrix anatis sp. nov., Erysipelothrix aquatica sp. nov. and Erysipelothrix urinaevulpis sp. nov., three novel species of the genus, and emended description of Erysipelothrix. Microbiology Society.Volume 72(7), 005454.

Entfellner, E., Li, R., Jiang, Y., Ru, J., Blom, J., Deng, L., Kurmayer, R.. (2022). Toxic/Bioactive Peptide Synthesis Genes Rearranged by Insertion Sequence Elements Among the Bloom-Forming Cyanobacteria Planktothrix. Frontiers Media SA.Volume 13.

Kämpfer, P., Glaeser, S., Blom, J., Wolf, J., Benning, S., Schloter, M., Neumann-Schaal, M.. (2022). Rhodococcus pseudokoreensis sp. nov. isolated from the rhizosphere of young M26 apple rootstocks. Springer Berlin Heidelberg Berlin/Heidelberg.Volume 204(8), 505.

Kuzmich, S., Blumenkamp, P., Meier, D., Szadkowski, D., Goesmann, A., Becker, A., Søgaard-Andersen, L.. (2022). CRP-Like Transcriptional Regulator MrpC Curbs c-di-GMP and 3′, 3′-cGAMP Nucleotide Levels during Development in Myxococcus xanthus. American Society for Microbiology 1752 N St., NW, Washington, DC.Volume 13(1), e00044--22.

Wittig, A., Miranda, F., Hölzer, M., Altenburg, T., Bartoszewicz, J., Beyvers, S., Dieckmann, M., Genske, U., Giese, S., Nowicka, M., Richard, H., Schiebenhoefer, H., Schmachtenberg, A., Sieben, P., Tang, M., Tembrockhaus, J., Renard, B., Fuchs, S.. (2022). CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance. Volume 38(17), 4223-4225.

Djahanschiri, Bardya AND Di Venanzio, Gisela AND Distel, Jesus S. AND Breisch, Jennifer AND Dieckmann, Marius Alfred AND Goesmann, Alexander AND Averhoff, Beate AND Göttig, Stephan AND Wilharm, Gottfried AND Feldman, Mario F. AND Ebersberger, Ingo. (2022). Evolutionarily stable gene clusters shed light on the common grounds of pathogenicity in the Acinetobacter calcoaceticus-baumannii complex. Public Library of Science.Volume 18(6), 1-40.

Octaviana, S., Lorenczyk Stefan, Ackert, F., Fenske, L., Wink, J.. (2022). Four new members of the family Cytophagaceae: Chryseosolibacter histidini gen. nov., sp. nov., Chryseosolibacter indicus gen. nov., sp. nov., Dawidia cretensis, gen. nov., sp. nov., and Dawidia soli, gen. nov., sp. nov. isolated from diverse habitat . Antonie van Leeuwenhoek. Volume 115(8), 1059–1072.

Fatton, M., Filippidou, S., Junier, T., Cailleau, G., Berge, M., Poppleton, D., Blum, T., Kaminek, M., Odriozola, A., Blom, J., others. (2022). Cryptosporulation in Kurthia spp. forces a rethinking of asporogenesis in Firmicutes. John Wiley \& Sons, Inc. Hoboken, USA.Volume 24(12), 6320--6335.

Guzman, J., Poehlein, A., Glaeser, S., Schwengers, O., Blom, J., Hollensteiner, J., Kämpfer, P., Vilcinskas, A.. (2022). Pseudocitrobacter corydidari sp. nov., isolated from the Asian emerald cockroach Corydidarum magnifica. Microbiology Society.Volume 72(8), 005497.

Sulja, A., Pothier, J., Blom, J., Moretti, C., Buonaurio, R., Rezzonico, F., Smits, T.. (2022). Comparative genomics to examine the endophytic potential of Pantoea agglomerans DAPP-PG 734. BioMed Central London.Volume 23(1), 742.

Maus, I., Wibberg, D., Belmann, P., Hahnke, S., Huang, L., Spröer, C., Bunk, B., Blom, J., Sczyrba, A., Pühler, A., others. (2022). The novel oligopeptide utilizing species Anaeropeptidivorans aminofermentans M3/9T, its role in anaerobic digestion and occurrence as deduced from large-scale fragment recruitment analyses. Frontiers Media SA.Volume 13.

Zboralski, A., Biessy, A., Ciotola, M., Cadieux, M., Albert, D., Blom, J., Filion, M.. (2022). Harnessing the genomic diversity of Pseudomonas strains against lettuce bacterial pathogens. Frontiers Media SA.Volume 13.

Volokhov, D., Furtak, V., Blom, J., Zagorodnyaya, T., Gao, Y., Gulland, F.. (2022). Mycoplasma miroungirhinis sp. nov. and Mycoplasma miroungigenitalium sp. nov., isolated from northern elephant seals (Mirounga angustirostris), Mycoplasma phocoenae sp. nov., isolated from harbour porpoise (Phocoena phocoena), and Mycoplasma phocoeninasale sp. nov., isolated from harbour porpoise and California sea lions (Zalophus californianus). Microbiology Society.Volume 72(1), 005224.

Blumenscheit, C., Jähne, J., Schneider, A., Blom, J., Schweder, T., Lasch, P., Borriss, R.. (2022). Genome sequence data of Bacillus velezensis BP1. 2A and BT2. 4. Elsevier.Volume 41, 107978.

Lau Vetter, M., Huang, B., Fenske, L., Blom, J.. (2022). Metabolism of the Genus Guyparkeria Revealed by Pangenome Analysis. MDPI.Volume 10(4), 724.

Fenske, L., Noll, I., Blom, J., Ewers, C., Semmler, T., Fawzy, A., Eisenberg, T.. (2022). A dominant clonal lineage of Streptococcus uberis in cattle in Germany. Antonie van Leeuwenhoek. Volume 115, 857–870

Fawzy, A., Giel, A., Fenske, L., Bach, A., Herden, C., Engel, K., Heuser, E., Boelhauve, M., Ulrich, R., Vogel, K., Schmidt, K., Eisenberg, T.. (2022). Development and validation of a triplex real-time qPCR for sensitive detection and quantification of major rat bite fever pathogen Streptobacillus moniliformis. J Microbiol Methods. Volume 199, 106525

Lau Vetter, M., Huang, B., Fenske, L., Blom, J.. (2022). Metabolism of the Genus Guyparkeria Revealed by Pangenome Analysis. MDPI. Volume 10(4), 724.

Ren, Y., Chakraborty, T., Doijad, S., Falgenhauer, L., Falgenhauer, J., Goesmann, A., Hauschild, A., Schwengers, O., Heider, D.. (2022). Prediction of antimicrobial resistance based on whole-genome sequencing and machine learning. Oxford University Press.Volume 38(2), 325--334.

Dardić, D., Böhringer, N., Plaza, A., Zubeil, F., Pohl, J., Sommer, S., Padva, L., Becker, J., Patras, M., Bill, M., others. (2022). Antidiabetic profiling of veramycins, polyketides accessible by biosynthesis, chemical synthesis and precursor-directed modification. Royal Society of Chemistry.Volume 9(6), 1604--1615.

Ren Y, Chakraborty T, Doijad S, Falgenhauer L, Falgenhauer J, Goesmann A, Schwengers O, Heider D (2022) Multi-label classification for multi-drug resistance prediction of Escherichia coli. Computational and structural biotechnology journal: 1264-1270, DOI:10.1016/j.csbj.2022.03.007

Ruinelli, M., Blom, J., Smits, T., Pothier, J.. (2022). Comparative genomics of Prunus-associated members of the Pseudomonas syringae species complex reveals traits supporting co-evolution and host adaptation. Frontiers Research Foundation.Volume 13(804681).

Fenske, L., Noll, I., Blom, J., Ewers, C., Semmler, T., Fawzy, A., Eisenberg, T.. (2022). A dominant clonal lineage of Streptococcus uberis in cattle in Germany. Springer International Publishing.

Neuzil-Bunesova, V., Ramirez Garcia, A., Modrackova, N., Makovska, M., Sabolova, M., Spröer, C., Bunk, B., Blom, J., Schwab, C.. (2022). Feed Insects as a Reservoir of Granadaene-Producing Lactococci. Frontiers.

Dia, N., Cottyn, B., Blom, J., Smits, T., Pothier, J.. (2022). Differentiation of the Xanthomonas hortorum--Xanthomonas hydrangeae species complex using sensitive and selective LAMP assays. Frontiers Research Foundation.Volume 4(898778).

Wittig, A., Miranda, F., Hölzer, M., Altenburg, T., Bartoszewicz, J., Beyvers, S., Dieckmann, M., Genske, U., Giese, S., Nowicka, M., others. (2022). CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance. Oxford University Press.Volume 38(17), 4223--4225.

Kupschus J, Janssen S, Hoek A, Kuska J, Rathjens J, Sonntag C, Ickstadt K, Budzinski L, Chang H-D, Rossi A, Esser C, Hochrath K, 2022. Rapid detection and online analysis of microbial changes through flow cytometry. Cytometry Part A

Dardić D, Böhringer N, Plaza A, Zubeil F, Pohl J, Sommer S, Padva L, Becker J, Patras MA, Bill M, Kurz M, Toti L, Görgens SW, Schuler SMM, Billion A, Schwengers O, Wohlfart P, Goesmann A, Tennagels N, Vilcinskas A, Hammann PE, Schäberle TF, Bauer A (2022) Antidiabetic profiling of veramycins, polyketides accessible by biosynthesis, chemical synthesis and precursor-directed modification. Organic Chemistry Frontiers, DOI:10.1039/D1QO01652K