SoftwareAs part of our research, our group is interested in developing and maintaining software projects applied in systems biology and bioinformatics to facilitate the understanding and analysis of complicated modeling techniques. Most projects can be found on the GitHub page of the group: https://github.com/MSBIDynamics If you have an idea and are interested in maintaining and contributing to our existing projects or collaborating to develop new ones that match our group's aim, please contact us.https://www.uni-giessen.de/de/fbz/fb08/Inst/msbid/research/softwarehttps://www.uni-giessen.de/@@site-logo/logo.png
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Software
As part of our research, our group is interested in developing and maintaining software projects applied in systems biology and bioinformatics to facilitate the understanding and analysis of complicated modeling techniques. Most projects can be found on the GitHub page of the group: https://github.com/MSBIDynamics If you have an idea and are interested in maintaining and contributing to our existing projects or collaborating to develop new ones that match our group's aim, please contact us.
NCMW
A metabolic modeling workflow for communities of organisms in an nasal medium. This implements functionality to analyze the interaction of metabolic models within a community.
The pymCADRE tool is an advanced re-implementation of the metabolic Context-specificity Assessed by Deterministic Reaction Evaluation (mCADRE) algorithm in Python. It constructs tissue-specific metabolic models by leveraging gene expression data and literature-based evidence, along with network topology information.
