Inhaltspezifische Aktionen

AG Friedhoff

Inhaltspezifische Aktionen

AG Friedhoff

Monakhova, M., Ryazanova, A., Kunetsky, V., Li, P., Shilkin, E., Kisil, O., Rao, D.N., Oretskaya, T., Friedhoff, P. and Kubareva, E. (2020) Probing the DNA-binding center of the MutL protein from the Escherichia coli mismatch repair system via crosslinking and Förster resonance energy transfer. Biochimie, 171-172: 43-54.


Wende, W., Friedhoff, P., Sträßer, K. (2019) Mechanism and Regulation of Co-transcriptional mRNP Assembly and Nuclear mRNA Export. In: Oeffinger M., Zenklusen D. (eds) The Biology of mRNA: Structure and Function. Advances in Experimental Medicine and Biology, vol 1203. Springer, Cham.

 

Schneider, T., Hung, L.H., Aziz, M., Wilmen, A., Thaum, S., Wagner, J., Janowski, R., Müller, S., Schreiner, S., Friedhoff, P., Hüttelmaier, S., Niessing, D., Sattler, M., Schlundt, A. and Bindereif, A. (2019) Combinatorial recognition of clustered RNA elements by the multidomain RNA-binding protein IMP3. Nature communications, 10:2266.

 

Mardenborough, Y.S.N., Nitsenko, K., Laffeber, C., Duboc, C., Sahin, E., Quessada-Vial, A., Winterwerp, H.H.K., Sixma, T.K., Kanaar, R., Friedhoff, P., Strick, T.R. and Lebbink, J.H.G. (2019) The unstructured linker arms of MutL enable GATC site incision beyond roadblocks during initiation of DNA mismatch repair. Nucleic acids research, 47:11667-11680.

 

Monakhova, M.V., Penkina, A.I., Pavlova, A.V., Lyaschuk, A.M., Kucherenko, V.V., Alexeevski, A.V., Lunin, V.G., Friedhoff, P., Klug, G., Oretskaya, T.S. and Kubareva, E.A. (2018) Endonuclease Activity of MutL Protein of the Rhodobacter sphaeroides Mismatch Repair System. Biochemistry. Biokhimiia, 83: 281-29.

 

Friedhoff, P., Manelyte, L., Giron-Monzon, L., Winkler, I., Groothuizen, F.S. and Sixma, T.K. (2017) Use of Single-Cysteine Variants for Trapping Transient States in DNA Mismatch Repair. Methods in enzymology, 592:77-101.

 

Hermans N, Laffeber C, Cristovão M, Artola-Borán M, Mardenborough Y, Ikpa P, Jaddoe A, Winterwerp HH, Wyman C, Jiricny J, Kanaar R, Friedhoff P and Lebbink JH. (2016) Dual daughter strand incision is processive and increases the efficiency of DNA mismatch repair. Nucleic Acids Res. 44(14):6770-86.


Friedhoff P, Li P, and Gotthardt J. (2016) Protein-protein interactions in DNA mismatch repair. DNA Repair 38: 50-7.

 

Groothuizen FS, Winkler I, Cristóvão M, Fish A, Winterwerp HH, Reumer A, Marx AD, Hermans N, Nicholls RA, Murshudov GN, Lebbink JH, Friedhoff P and Sixma TK. (2015) MutS/MutL crystal structure reveals that the MutS sliding clamp loads MutL onto DNA. Elife 4: e06744.

 

Perevozchikova SA, Trikin RM, Heinze RJ, Romanova EA, Oretskaya TS, Friedhoff P, Kubareva EA. (2014) Is thymidine glycol containing DNA a substrate of E. coli DNA mismatch repair system? PLoS One. Aug 18;9(8):e104963.

 

Perevoztchikova SA, Romanova EA, Oretskaya TS, Friedhoff P, Kubareva EA. (2013) Modern aspects of the structural and functional organization of the DNA mismatch repair system. Acta Naturae Jul;5(3):17-34.

 

Groothuizen FS, Fish A, Petoukhov MV, Reumer A, Manelyte L, Winterwerp HH, Marinus MG, Lebbink JH, Svergun DI, Friedhoff P, Sixma TK. (2013) Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation. Nucleic Acids Res. Sep;41(17):8166-81.

 

Gabsalilow L, Schierling B, Friedhoff P, Pingoud A, Wende W. (2013) Site- and strand-specific nicking of DNA by fusion proteins derived from MutH and I-SceI or TALE repeats. Nucleic Acids Res. Apr;41(7):e83.

 

Heinze RJ, Sekerina S, Winkler I, Biertümpfel C, Oretskaya TS, Kubareva E, Friedhoff P. (2012) Covalently trapping MutS on DNA to study DNA mismatch recognition and signaling. Mol Biosyst. Jul 6;8(7):1861-4.

 

Cristóvão M, Sisamakis E, Hingorani MM, Marx AD, Jung CP, Rothwell PJ, Seidel CA, Friedhoff P. (2012) Single-molecule multiparameter fluorescence spectroscopy reveals directional MutS binding to mismatched bases in DNA. Nucleic Acids Res. Jul 1;40(12):5448-5464.

 

Midon M, Gimadutdinow O, Meiss G, Friedhoff P, Pingoud A. (2012) Chemical rescue of active site mutants of the S. pneumoniae surface endonuclease EndA and other nucleases of the H-N-H family by imidazole. ChemBioChem 13, 713-721.

 

Xiao Y, Jung C, Marx AD, Winkler I, Wyman C, Lebbink JH, Friedhoff P, Cristovao M. (2011) Generation of DNA nanocircles containing mismatched bases. Biotechniques Oct;51(4):259-62, 264-5.

 

Ryazanova AY, Winkler I, Friedhoff P, Viryasov MB, Oretskaya TS, Kubareva EA. (2011) Crosslinking of (cytosine-5)-DNA methyltransferase SsoII and its complexes with specific DNA duplexes provides an insight into their structures. Nucleosides Nucleotides Nucleic Acids Jul-Aug;30(7-8):632-50.

 

Monti MC, Cohen SX, Fish A, Winterwerp HH, Barendregt A, Friedhoff P, Perrakis A, Heck AJ, Sixma TK, van den Heuvel RH, Lebbink JH. (2011) Native mass spectrometry provides direct evidence for DNA mismatch-induced regulation of asymmetric nucleotide binding in mismatch repair protein MutS. Nucleic Acids Res. Oct;39(18):8052-64.

 

Winkler I, Marx AD, Lariviere D, Heinze R, Cristovao M, Reumer A, Curth U, Sixma TK, Friedhoff P. (2011) Chemical trapping of the dynamic MUTS-MUTL complex formed in DNA mismatch repair in Escherichia coli. J Biol Chem. May 13;286(19):17326-37.

 

Hanstein S, Wang X, Qian X, Friedhoff P, Fatima A, Shan Y, Feng K, Schubert S. (2011) Changes in cytosolic Mg2+ levels can regulate the activity of the plasma membrane H+-ATPase in maize. Biochem J. Apr 1;435(1):93-101.

 

Riazanova AIu, Molochkov NV, Abrosimova LA, Alekseevskiĭ AV, Kariagina AS, Protsenko AS, Friedhoff P, Oretskaia TS, Kubareva EA. (2010) Secondary structure of SsoII-like (cytosine-5)-DNA methyltransferases N-terminal region determined by circular dichroism spectroscopy. Mol Biol (Mosk) Sep-Oct;44(5):911-21. Russian.

 

Namadurai S, Jain D, Kulkarni DS, Tabib CR, Friedhoff P, Rao DN, Nair DT. (2010) The C-terminal domain of the MutL homolog from Neisseria gonorrhoeae forms an inverted homodimer. PLoS One Oct 28;5(10):e13726.